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一种用于定量慢病毒载体感染滴度的数字PCR方法的开发与验证

Development and validation of a droplet digital PCR method for quantifying lentiviral vector infectious titer.

作者信息

Wu Xueling, Zhou Xiaoya, Wang Yueming, Wu Jian, Liang Qian, Yang Xu, Zhang Kehua, Meng Shufang

机构信息

National Institutes for Food and Drug Control, Beijing, 100050, China.

State Key Laboratory of Drug Regulatory Science, Beijing, 100050, China.

出版信息

Heliyon. 2024 Oct 1;10(20):e38512. doi: 10.1016/j.heliyon.2024.e38512. eCollection 2024 Oct 30.

Abstract

Lentiviruses, with their high transduction efficiency and gene expression levels, are widely used as gene delivery vectors in the development of chimeric antigen receptor T cells (CAR-T) and other genetically modified cell therapies. Accurate determination of the lentiviral vector infectious titer is essential to ensure effective transduction and product consistency. In this study, we developed an efficient method for lentiviral vector titration based on digital droplet polymerase chain reaction (ddPCR) technology, enabling absolute quantification of the target gene. Benzonase treatment of non-transduced plasmids substantially shortened the experimental period, reducing cell culture duration from 10-14 days-3 days. The method was rigorously validated by assessing specificity, working range, limit of quantification, precision, accuracy, and robustness. This study demonstrates the feasibility of combining enzymatic digestion with ddPCR to quantify lentiviral vector infectious titer and provides a detailed and readily adaptable methodology for the scientific community.

摘要

慢病毒因其高转导效率和基因表达水平,在嵌合抗原受体T细胞(CAR-T)及其他基因修饰细胞疗法的开发中被广泛用作基因递送载体。准确测定慢病毒载体感染滴度对于确保有效转导和产品一致性至关重要。在本研究中,我们基于数字液滴聚合酶链反应(ddPCR)技术开发了一种高效的慢病毒载体滴定方法,能够对靶基因进行绝对定量。用核酸酶处理未转导的质粒可大幅缩短实验周期,将细胞培养时间从10 - 14天缩短至3天。该方法通过评估特异性、工作范围、定量限、精密度、准确度和稳健性进行了严格验证。本研究证明了将酶切消化与ddPCR相结合来定量慢病毒载体感染滴度的可行性,并为科学界提供了一种详细且易于应用的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c44/11532291/f2f9f63ef641/gr1.jpg

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