Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid e Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria/Consejo Superior de Investigaciones Científicas, Madrid 28223, Spain.
Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Madrid 28040, Spain.
Proc Natl Acad Sci U S A. 2024 Nov 12;121(46):e2406198121. doi: 10.1073/pnas.2406198121. Epub 2024 Nov 6.
The maturation and installation of the active site metal cluster (FeMo-co, FeSCMo--homocitrate) in Mo-dependent nitrogenase requires the protein product of the gene for production of the FeS cluster precursor (NifB-co, [FeSC]) and the action of the maturase complex composed of the protein products from the and genes. However, some putative diazotrophic bacteria, like sp. RS-1, lack the genes, suggesting an alternative pathway for maturation of FeMo-co that does not require NifEN. In this study, the NifH, NifB, and apo-NifDK proteins produced in are shown to be sufficient for FeMo-co maturation and insertion into the NifDK protein to achieve active nitrogenase. The expressed NifDK contained P-clusters but was devoid of FeMo-co (referred to as apo-NifDK). Apo-NifDK could be activated for N reduction by addition of preformed FeMo-co. Further, it was found that apo-NifDK plus produced NifB and NifH were sufficient to yield active NifDK when incubated with the necessary substrates (homocitrate, molybdate, and -adenosylmethionine [SAM]), demonstrating that these proteins can replace the need for NifEN in maturation of Mo-nitrogenase. The produced NifH and NifB proteins were independently shown to be functional. The reconstituted NifDK demonstrated reduction of N, protons, and acetylene in ratios observed for NifDK. These findings reveal a distinct NifEN-independent pathway for nitrogenase activation involving NifH, NifB, and apo-NifDK.
活性位点金属簇(FeMo-co,FeSCMo--homocitrate)在 Mo 依赖性氮酶中的成熟和安装需要基因产物的蛋白质生产 FeS 簇前体(NifB-co,[FeSC])和成熟酶复合物的作用,该复合物由基因产物组成。然而,一些假定的固氮细菌,如 sp。RS-1,缺乏基因,这表明 FeMo-co 成熟的替代途径不需要 NifEN。在这项研究中,在中产生的 NifH、NifB 和 apo-NifDK 蛋白被证明足以进行 FeMo-co 成熟并插入 NifDK 蛋白以实现活性氮酶。表达的 NifDK 含有 P 簇,但缺乏 FeMo-co(称为 apo-NifDK)。Apo-NifDK 可以通过添加预先形成的 FeMo-co 来激活 N 还原。此外,还发现 apo-NifDK 加产生的 NifB 和 NifH 足以在与必要的底物(homocitrate、钼酸盐和 -腺苷甲硫氨酸 [SAM])孵育时产生活性 NifDK,这表明这些蛋白质可以替代 NifEN 在 Mo-氮酶成熟中的需要。独立表明产生的 NifH 和 NifB 蛋白是功能性的。重新构成的 NifDK 证明了在观察到的 NifDK 中还原 N、质子和乙炔的比率。这些发现揭示了一种独特的 NifEN 独立途径,涉及 NifH、NifB 和 apo-NifDK 来激活氮酶。