Song Binyang, Lou Jinzhan, Mu Lijun, Lu Xiao, Sun Jian, Tang Bo
Department of Hematology, The Second Affiliated Hospital of Dalian Medical University, Dalian, 116023, People's Republic of China.
Curr Med Chem. 2024 Nov 5. doi: 10.2174/0109298673334218241021044800.
To build an innovative telomere-associated scoring model to predict prognosis and treatment responsiveness in acute myeloid leukemia (AML).
AML is a highly heterogeneous malignant hematologic disorder with a poor prognosis. While telomere maintenance is frequently observed in tumors, investigations into telomere-related genes (TRGs) in AML remain limited.
This study aimed to identify prognostic TRGs using the least absolute shrinkage and selection operator (LASSO) Cox regression and multivariate Cox regression, evaluate their predictive value, explore the association between TRG scores and immune cell infiltration, and assess the sensitivity of high-scoring AML patients to chemotherapeutic agents.
Univariate Cox regression analysis was conducted on the TCGA cohort to identify prognostic TRGs and to develop the TRG scoring model using LASSO-Cox and multivariate Cox regression. Validation was performed on the GSE37642 cohort. Immune cell infiltration patterns were assessed through computational analysis, and the sensitivity to chemotherapeutic agents was evaluated.
Thirteen prognostic TRGs were identified, and a seven-TRG scoring model (including NOP10, OBFC1, PINX1, RPA2, SMG5, MAPKAPK5, and SMN1) was developed. Higher TRG scores were associated with a poorer prognosis, as confirmed in the GSE37642 cohort, and remained an independent prognostic factor even after adjusting for other clinical characteristics. The high-score group was characterized by elevated infiltration of B cells, T helper cells, natural killer cells, tumor-infiltrating lymphocytes, regulatory T (Treg) cells, M2 macrophages, neutrophils, and monocytes, along with reduced infiltration of gamma delta T cells, CD4- T cells, and resting mast cells. Moreover, high infiltration of M2 macrophages and Tregs was associated with poor overall survival compared to low infiltration. Notably, high-risk AML patients were resistant to Erlotinib, Parthenolide, and Nutlin-3a, but sensitive to AC220, Midostaurin, and Tipifarnib. Additionally, using RT-qPCR, we observed significantly higher expression of two model genes, OBFC1 and SMN1, in AML tissues compared to control tissues.
This innovative TRG scoring model demonstrates considerable predictive value for AML patient prognosis, offering valuable insights for optimizing treatment strategies and personalized medicine approaches. The identified TRGs and associated scoring models could aid in risk stratification and guide tailored therapeutic interventions in AML patients.
构建一种创新的端粒相关评分模型,以预测急性髓系白血病(AML)的预后和治疗反应性。
AML是一种高度异质性的恶性血液系统疾病,预后较差。虽然肿瘤中经常观察到端粒维持现象,但对AML中端粒相关基因(TRGs)的研究仍然有限。
本研究旨在使用最小绝对收缩和选择算子(LASSO)Cox回归和多变量Cox回归来识别预后TRGs,评估其预测价值,探索TRG评分与免疫细胞浸润之间的关联,并评估高评分AML患者对化疗药物的敏感性。
对TCGA队列进行单变量Cox回归分析,以识别预后TRGs,并使用LASSO-Cox和多变量Cox回归建立TRG评分模型。在GSE37642队列上进行验证。通过计算分析评估免疫细胞浸润模式,并评估对化疗药物的敏感性。
鉴定出13个预后TRGs,并建立了一个包含7个TRG的评分模型(包括NOP10、OBFC1、PINX1、RPA2、SMG5、MAPKAPK5和SMN1)。较高的TRG评分与较差的预后相关,这在GSE37642队列中得到证实,并且即使在调整其他临床特征后,仍然是一个独立的预后因素。高分患者组的特征是B细胞、辅助性T细胞、自然杀伤细胞、肿瘤浸润淋巴细胞、调节性T(Treg)细胞、M2巨噬细胞、中性粒细胞和单核细胞的浸润增加,同时γδT细胞、CD4-T细胞和静息肥大细胞的浸润减少。此外,与低浸润相比,M2巨噬细胞和Tregs的高浸润与较差的总生存期相关。值得注意的是,高危AML患者对厄洛替尼、小白菊内酯和Nutlin-3a耐药,但对AC220、米哚妥林和替匹法尼敏感。此外,使用RT-qPCR,我们观察到与对照组织相比,AML组织中两个模型基因OBFC1和SMN1的表达显著更高。
这种创新的TRG评分模型对AML患者的预后具有相当大的预测价值,为优化治疗策略和个性化医疗方法提供了有价值的见解。所鉴定的TRGs和相关评分模型有助于AML患者的风险分层并指导定制的治疗干预。