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潜在的隐存多样性在属 (真鲨目:真鲨科):来自线粒体基因组测序的见解。

Potential Cryptic Diversity in the Genus (Carcharhiniformes: Carcharhinidae): Insights from Mitochondrial Genome Sequencing.

机构信息

College of Marine Sciences, South China Agriculture University, Guangzhou 510642, China.

Sino-Thai Research Center of Marine Technology, Zhejiang Mariculture Research Institute, Wenzhou 325000, China.

出版信息

Int J Mol Sci. 2024 Nov 4;25(21):11851. doi: 10.3390/ijms252111851.

Abstract

is a genus of small placental sharks living in offshore waters. For a long time, the genus was considered a monotypic genus until a valid species, , was confirmed in 2010. However, in the same study was not widely recognized because of the lack of evidence. In this study, we obtained the complete mitochondrial genome of the genus from Ranong, Thailand, and tentatively named it sp. By comparing the complete mitochondrial genome with those of two other species and conducting phylogenetic and divergence time analyses, we determined that sp. diverged from the other species. These findings indicate the potential for a new cryptic species ( sp.) in the genus. This conclusion was further supported by a subsequent analysis of the published control region sequences from previous studies. Finally, based on these conclusions, we used machine learning to derive a new identification method for the cryptic species. This approach may be useful for the discovery of new species or cryptic species in other organisms.

摘要

是近海生活的小型胎盘鲨属。长期以来,该属被认为是单型属,直到 2010 年才确认了一个有效物种,。然而,在同一研究中,由于缺乏证据,并没有得到广泛认可。在本研究中,我们从泰国拉廊获得了属的完整线粒体基因组,并暂命名为 sp.。通过与另外两个物种的完整线粒体基因组进行比较,并进行系统发育和分化时间分析,我们确定 sp.与其他物种分化。这些发现表明该属可能存在一个新的隐种(sp.)。这一结论随后也得到了对先前研究中已发表的 控制区序列的分析的支持。最后,基于这些结论,我们使用机器学习为隐种衍生了一种新的鉴定方法。这种方法可能有助于发现其他生物中的新物种或隐种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8dbe/11546983/04d774fc369a/ijms-25-11851-g001.jpg

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