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精神障碍疾病中内在无序蛋白质的概况。

Landscape of intrinsically disordered proteins in mental disorder diseases.

作者信息

Zhang Xinwu, Song Xixi, Hu Guangchun, Yang Yaqing, Liu Ruotong, Zhou Na, Basu Sankar, Qiao Dongdong, Hou Qingzhen

机构信息

Department of Biostatistics, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan 250100, China.

National Institute of Health Data Science of China, Shandong University, Jinan 250100, China.

出版信息

Comput Struct Biotechnol J. 2024 Oct 28;23:3839-3849. doi: 10.1016/j.csbj.2024.10.043. eCollection 2024 Dec.

Abstract

Disrupted genes linked to mental disorders sometimes exhibit characteristics of Intrinsically Disordered Proteins (IDPs). However, few studies have comprehensively explored the functional associations between protein disorder properties and different psychiatric disorders. In this study, we collected disrupted proteins for seven mental diseases (MDD, SCZ, BP, ID, AD, ADHD, ASD) and a control dataset from normal brains. After calculating the disorder scores for each protein, we thoroughly compared the proportions and functions of IDPs between differentially expressed proteins in each disease and healthy controls. Our findings revealed that disrupted proteins, particularly in ASD and ADHD, contain more IDPs than controls from normal brains. Distinct patterns in disorder properties were observed among different mental disorders. Functional enrichment analysis indicated that IDPs in mental disorders were associated with neurodevelopment, synaptic signaling, and gene expression regulatory pathways. In addition, we analyzed the proportion and function of liquid-phase-separated proteins (LLPS) in psychiatric disorders, finding that LLPS proteins are mainly enriched in pathways related to neurodevelopment and inter-synaptic signaling. Furthermore, to validate our findings, we conducted an analysis of differentially expressed genes in an ASD cohort, revealing that the encoded proteins also exhibit a higher proportion of IDPs. Notably, these IDPs were particularly enriched in pathways related to neurodevelopment, including head development, a process known to be disrupted in ASD. Our study sheds light on the crucial role of IDPs in psychiatric disorders, enhancing our understanding of their molecular mechanisms.

摘要

与精神障碍相关的基因破坏有时会表现出内在无序蛋白(IDP)的特征。然而,很少有研究全面探讨蛋白质无序特性与不同精神疾病之间的功能关联。在本研究中,我们收集了七种精神疾病(重度抑郁症、精神分裂症、双相情感障碍、智力障碍、阿尔茨海默病、注意力缺陷多动障碍、自闭症谱系障碍)的破坏蛋白以及来自正常大脑的对照数据集。在计算每种蛋白质的无序得分后,我们全面比较了每种疾病中差异表达蛋白与健康对照之间IDP的比例和功能。我们的研究结果表明,破坏蛋白,尤其是在自闭症谱系障碍和注意力缺陷多动障碍中,比正常大脑的对照含有更多的IDP。在不同精神障碍中观察到无序特性的不同模式。功能富集分析表明,精神障碍中的IDP与神经发育、突触信号传导和基因表达调控途径有关。此外,我们分析了精神疾病中液相分离蛋白(LLPS)的比例和功能,发现LLPS蛋白主要富集在与神经发育和突触间信号传导相关的途径中。此外,为了验证我们的研究结果,我们对一个自闭症谱系障碍队列中的差异表达基因进行了分析,发现编码的蛋白质也表现出更高比例的IDP。值得注意的是,这些IDP特别富集在与神经发育相关的途径中,包括头部发育,这一过程在自闭症谱系障碍中已知会受到破坏。我们的研究揭示了IDP在精神疾病中的关键作用,增进了我们对其分子机制的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5085/11554586/0294aa38648b/ga1.jpg

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