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剪切变稀粘弹性流体中的鞭毛泵送效率

Flagellum Pumping Efficiency in Shear-Thinning Viscoelastic Fluids.

作者信息

Barrett Aaron, Fogelson Aaron L, Gregory Forest M, Gruninger Cole, Lim Sookkyung, Griffith Boyce E

机构信息

Department of Mathematics, University of Utah, Salt Lake City, UT, USA.

Departments of Mathematics and Biomedical Engineering, University of Utah, Salt Lake City, UT, USA.

出版信息

J Fluid Mech. 2024 Nov 25;999. doi: 10.1017/jfm.2024.666. Epub 2024 Nov 11.

DOI:10.1017/jfm.2024.666
PMID:39553418
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11566911/
Abstract

Microorganism motility often takes place within complex, viscoelastic fluid environments, e.g., sperm in cervicovaginal mucus and bacteria in biofilms. In such complex fluids, strains and stresses generated by the microorganism are stored and relax across a spectrum of length and time scales and the complex fluid can be driven out of its linear response regime. Phenomena not possible in viscous media thereby arise from feedback between the swimmer and the complex fluid, making swimming efficiency co-dependent on the propulsion mechanism and fluid properties. Here we parameterize a flagellar motor and filament properties together with elastic relaxation and nonlinear shear-thinning properties of the fluid in a computational immersed boundary model. We then explore swimming efficiency, defined as a particular flow rate divided by the torque required to spin the motor, over this parameter space. Our findings indicate that motor efficiency (measured by the volumetric flow rate) can be boosted or degraded by relatively moderate or strong shear-thinning of the viscoelastic environment.

摘要

微生物的运动通常发生在复杂的粘弹性流体环境中,例如,宫颈阴道粘液中的精子和生物膜中的细菌。在这种复杂流体中,微生物产生的应变和应力会在一系列长度和时间尺度上存储和松弛,并且复杂流体可能会偏离其线性响应范围。粘性介质中不可能出现的现象因此源于游动者与复杂流体之间的反馈,使得游泳效率共同依赖于推进机制和流体特性。在这里,我们在计算浸入边界模型中,将鞭毛马达和细丝特性与流体的弹性松弛和非线性剪切变稀特性一起进行参数化。然后,我们在这个参数空间中探索游泳效率,将其定义为特定流速除以驱动马达所需的扭矩。我们的研究结果表明,粘弹性环境相对适度或强烈的剪切变稀可以提高或降低马达效率(通过体积流速来衡量)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/d6897999d7f8/nihms-2018445-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/9432d432998c/nihms-2018445-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/ee05b5968f85/nihms-2018445-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/ef4c95697e1d/nihms-2018445-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/1cf66b45774b/nihms-2018445-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/1d1bd145ad51/nihms-2018445-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/cb64749e9ef4/nihms-2018445-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/83439a147e47/nihms-2018445-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/7b6f4c147fb8/nihms-2018445-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/d6897999d7f8/nihms-2018445-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/9432d432998c/nihms-2018445-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/ee05b5968f85/nihms-2018445-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/ef4c95697e1d/nihms-2018445-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/1cf66b45774b/nihms-2018445-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/1d1bd145ad51/nihms-2018445-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/cb64749e9ef4/nihms-2018445-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/83439a147e47/nihms-2018445-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/7b6f4c147fb8/nihms-2018445-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c405/11566911/d6897999d7f8/nihms-2018445-f0010.jpg

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本文引用的文献

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On the Lagrangian-Eulerian Coupling in the Immersed Finite Element/Difference Method.沉浸有限元/差分法中的拉格朗日-欧拉耦合
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Study of bovine sperm motility in shear-thinning viscoelastic fluids.牛精子在剪切稀化黏弹流体中的运动研究。
J Biomech. 2019 May 9;88:130-137. doi: 10.1016/j.jbiomech.2019.03.035. Epub 2019 Mar 30.
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Phys Rev E. 2018 Jan;97(1-1):012402. doi: 10.1103/PhysRevE.97.012402.
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Flagellar swimming in viscoelastic fluids: role of fluid elastic stress revealed by simulations based on experimental data.基于实验数据的模拟揭示了粘弹性流体中鞭毛游动:流体弹性应力的作用。
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Modeling polymorphic transformation of rotating bacterial flagella in a viscous fluid.在粘性流体中旋转细菌鞭毛的多晶型转变建模。
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