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综合单细胞分析揭示骨肉瘤的异质性及治疗见解。

Integrated single-cell analysis reveals heterogeneity and therapeutic insights in osteosarcoma.

作者信息

He Dongan, Che Xiaoqian, Zhang Haiming, Guo Jiandong, Cai Lei, Li Jian, Zhang Jinxi, Jin Xin, Wang Jianfeng

机构信息

Department of Orthopaedics, Hangzhou Ninth People's Hospital, Hangzhou, China.

出版信息

Discov Oncol. 2024 Nov 18;15(1):669. doi: 10.1007/s12672-024-01523-x.

DOI:10.1007/s12672-024-01523-x
PMID:39556142
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11573940/
Abstract

Osteosarcoma (OSA) is a primary bone malignancy characterized by its aggressive nature and high propensity for metastasis. Despite advancements in multimodal therapies, the clinical outcomes for OSA patients remain suboptimal, necessitating deeper molecular insights for improved therapeutic strategies. Here, we employed single-cell RNA sequencing (scRNA-seq) to elucidate the cellular heterogeneity and transcriptional dynamics of OSA tumors. Our study identified eleven distinct tumor cell subpopulations, including osteoblastic, chondroblastic, and myeloid lineages, each exhibiting unique transcriptional profiles associated with disease progression and metastasis. Epithelial-mesenchymal transition (EMT) emerged as a critical process driving aggressive phenotypes, supported by gene set enrichment analyses (GSVA) and transcription factor regulatory network analyses. Integration of copy number variation (CNV) data highlighted genomic alterations in osteoblastic and chondroblastic cells, implicating potential therapeutic targets. Furthermore, immune cell infiltration analyses revealed distinct immune profiles across OSA subtypes, correlating with tumor mutational burden (TMB) and clinical outcomes. Our findings underscore the complexity of OSA biology and provide a foundation for developing personalized treatment strategies targeting tumor heterogeneity and immune interactions.

摘要

骨肉瘤(OSA)是一种原发性骨恶性肿瘤,其特点是具有侵袭性且转移倾向高。尽管多模式治疗取得了进展,但OSA患者的临床结局仍不尽人意,因此需要更深入的分子见解来改进治疗策略。在此,我们采用单细胞RNA测序(scRNA-seq)来阐明OSA肿瘤的细胞异质性和转录动态。我们的研究确定了11个不同的肿瘤细胞亚群,包括成骨细胞、软骨细胞和髓系谱系,每个亚群都表现出与疾病进展和转移相关的独特转录谱。基因集富集分析(GSVA)和转录因子调控网络分析表明,上皮-间质转化(EMT)是驱动侵袭性表型的关键过程。拷贝数变异(CNV)数据的整合突出了成骨细胞和软骨细胞中的基因组改变,提示了潜在的治疗靶点。此外,免疫细胞浸润分析揭示了OSA各亚型不同的免疫谱,与肿瘤突变负荷(TMB)和临床结局相关。我们的研究结果强调了OSA生物学的复杂性,并为制定针对肿瘤异质性和免疫相互作用的个性化治疗策略奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/cba3eb5a9310/12672_2024_1523_Fig9_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/e08c24a24110/12672_2024_1523_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/cba3eb5a9310/12672_2024_1523_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/24aee919d978/12672_2024_1523_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/38427d8b164c/12672_2024_1523_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/c1de5f4d4339/12672_2024_1523_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/539355cdcfe7/12672_2024_1523_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/29abf6fd4bc7/12672_2024_1523_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/c60493d6ce82/12672_2024_1523_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/1c2c72ceb8c9/12672_2024_1523_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/e08c24a24110/12672_2024_1523_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbd2/11573940/cba3eb5a9310/12672_2024_1523_Fig9_HTML.jpg

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本文引用的文献

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Deciphering the heterogeneity and immunosuppressive function of regulatory T cells in osteosarcoma using single-cell RNA transcriptome.利用单细胞RNA转录组解析骨肉瘤中调节性T细胞的异质性和免疫抑制功能
Comput Biol Med. 2023 Oct;165:107417. doi: 10.1016/j.compbiomed.2023.107417. Epub 2023 Sep 1.
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The interaction between osteosarcoma and other cells in the bone microenvironment: From mechanism to clinical applications.骨肉瘤与骨微环境中其他细胞之间的相互作用:从机制到临床应用
Front Cell Dev Biol. 2023 May 3;11:1123065. doi: 10.3389/fcell.2023.1123065. eCollection 2023.
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Molecular mechanisms of osteosarcoma metastasis and possible treatment opportunities.
骨肉瘤转移的分子机制及可能的治疗机会。
Front Oncol. 2023 May 1;13:1117867. doi: 10.3389/fonc.2023.1117867. eCollection 2023.
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Single-Cell Multiomics.单细胞多组学
Annu Rev Biomed Data Sci. 2023 Aug 10;6:313-337. doi: 10.1146/annurev-biodatasci-020422-050645. Epub 2023 May 9.
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Osteosarcoma tumors maintain intra-tumoral transcriptional heterogeneity during bone and lung colonization.骨肉瘤肿瘤在骨和肺定植过程中保持肿瘤内转录异质性。
BMC Biol. 2023 Apr 27;21(1):98. doi: 10.1186/s12915-023-01593-3.
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Regulation of the Epithelial to Mesenchymal Transition in Osteosarcoma.成骨肉瘤中上皮间质转化的调控。
Biomolecules. 2023 Feb 20;13(2):398. doi: 10.3390/biom13020398.
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Mechanism and Role of Endoplasmic Reticulum Stress in Osteosarcoma.内质网应激在骨肉瘤中的机制和作用。
Biomolecules. 2022 Dec 15;12(12):1882. doi: 10.3390/biom12121882.
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Spatial multi-omics analyses of the tumor immune microenvironment.肿瘤免疫微环境的空间多组学分析。
J Biomed Sci. 2022 Nov 14;29(1):96. doi: 10.1186/s12929-022-00879-y.
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Origin and Therapies of Osteosarcoma.骨肉瘤的起源与治疗
Cancers (Basel). 2022 Jul 19;14(14):3503. doi: 10.3390/cancers14143503.
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Recent and Ongoing Research into Metastatic Osteosarcoma Treatments.转移性骨肉瘤治疗的最新和正在进行的研究。
Int J Mol Sci. 2022 Mar 30;23(7):3817. doi: 10.3390/ijms23073817.