单细胞RNA测序分析揭示了TXNDC5在瘢痕疙瘩形成中的作用。

Single-cell RNA sequencing analysis reveals the role of TXNDC5 in keloid formation.

作者信息

Liu Zhikun, Xian Lining, Li Jianmin, Zheng Shudan, Xie Hongju

机构信息

Department of Plastic Surgery, The Second Affiliated Hospital of Hainan Medical University, Haikou, Hainan, China.

Department of Dermatology, The First Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou, China.

出版信息

Cytojournal. 2024 Oct 31;21:40. doi: 10.25259/Cytojournal_58_2024. eCollection 2024.

Abstract

OBJECTIVE

Thioredoxin domain-containing protein 5 (TXNDC5) is associated with fibrosis in a variety of organs, but its mechanism of action in keloid is unclear. In this study, we aimed to investigate the mechanism of TXNDC5 in keloid.

MATERIAL AND METHODS

Single-cell RNA sequencing data of keloid and normal scar samples obtained from public databases were normalized and clustered using the Seurat package. Pathway enrich analysis was conducted using biological process enrichment analysis and Gene Set Enrichment Analysis (GSEA). In addition, TXNDC5 expression and its effects on migration and invasion of keloid fibroblasts (KFs) were validated based on cell function experiments.

RESULTS

A total of five cell types were obtained. The KF clusters were further clustered into two fibroblast subtypes (Fibroblast cells 1 and Fibroblast cells 2). Biological process enrichment analysis showed that transforming growth factor beta (TGF-β) signaling pathway was enriched in the two fibroblast subtypes. GSEA analysis demonstrated that genes in TGF-β signaling pathway were mainly enriched in Fibroblast cells 1, and that genes involved in cell proliferation, migration, and the TGF-β signaling pathway were all high-expressed in fibroblast cells 1. TXNDC5 was positively correlated with fibroblast proliferation, migration and TGF-β signaling pathway, and AUCell score. The cellular experiment confirmed that the messenger RNA and protein levels of TXNDC5 and TGF-β1 were high-expressed in KFs cells (<0.001), and that knockdown of TXNDC5 downregulated TGF-β1 expression and inhibited migration and invasion of KFs (<0.0001).

CONCLUSION

Our study indicated that TGF-β signaling pathway was enriched in fibroblast cells, and TXNDC5 was positively correlated with proliferation, migration, and TGF-β signaling pathway. Cellular experiment demonstrated that knocking down TXNDC5 downregulated TGF-β1 expression, and suppressed migration and invasion of KFs. The current discoveries provided a new therapeutic strategy for the treatment of keloid.

摘要

目的

含硫氧还蛋白结构域蛋白5(TXNDC5)与多种器官的纤维化相关,但其在瘢痕疙瘩中的作用机制尚不清楚。在本研究中,我们旨在探讨TXNDC5在瘢痕疙瘩中的作用机制。

材料与方法

从公共数据库获得的瘢痕疙瘩和正常瘢痕样本的单细胞RNA测序数据,使用Seurat软件包进行标准化和聚类。采用生物学过程富集分析和基因集富集分析(GSEA)进行通路富集分析。此外,基于细胞功能实验验证TXNDC5的表达及其对瘢痕疙瘩成纤维细胞(KFs)迁移和侵袭的影响。

结果

共获得五种细胞类型。KF簇进一步聚类为两种成纤维细胞亚型(成纤维细胞1和成纤维细胞2)。生物学过程富集分析表明,转化生长因子β(TGF-β)信号通路在这两种成纤维细胞亚型中富集。GSEA分析表明,TGF-β信号通路中的基因主要在成纤维细胞1中富集,且参与细胞增殖、迁移和TGF-β信号通路的基因在成纤维细胞1中均高表达。TXNDC5与成纤维细胞增殖、迁移、TGF-β信号通路及AUCell评分呈正相关。细胞实验证实,TXNDC5和TGF-β1的信使核糖核酸和蛋白水平在KFs细胞中高表达(<0.001),敲低TXNDC5可下调TGF-β1表达,并抑制KFs的迁移和侵袭(<0.0001)。

结论

我们的研究表明,TGF-β信号通路在成纤维细胞中富集,TXNDC5与增殖、迁移及TGF-β信号通路呈正相关。细胞实验表明,敲低TXNDC5可下调TGF-β1表达,并抑制KFs的迁移和侵袭。目前的发现为瘢痕疙瘩的治疗提供了一种新的治疗策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f2/11574684/efa5addde4f8/Cytojournal-21-40-g001.jpg

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