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埃塞俄比亚西北部人与乳制品界面中非伤寒沙门氏菌的血清型、毒力因子和抗菌药物耐药谱:一种大健康方法。

Serovars, virulence factors, and antimicrobial resistance profile of non-typhoidal Salmonella in the human-dairy interface in Northwest Ethiopia: A one health approach.

机构信息

Department of Medical Microbiology, College of Medicine and Health Sciences, University of Gondar, Gondar, Ethiopia.

Department of Pathobiology, College of Veterinary Medicine and Animal Sciences, University of Gondar, Gondar, Ethiopia.

出版信息

PLoS Negl Trop Dis. 2024 Nov 20;18(11):e0012646. doi: 10.1371/journal.pntd.0012646. eCollection 2024 Nov.

Abstract

Non-typhoidal Salmonella (NTS) is a zoonotic pathogen that exerts huge public health and economic impacts in the world. The severity of illness is mainly related to the serovars involved, the presence of virulence genes, and antimicrobial resistance (AMR) patterns. However, data are scarce on serovars, virulence genes, and AMR among NTS identified from the human-dairy interface in Northwest Ethiopia. Thus, this study investigated the serovars, common virulence genes, and AMR patterns of NTS isolates in the area. The study was conducted from June 2022 to August 2023 among randomly selected 58 dairy farms. A total of 362 samples were processed to detect NTS using standard bacteriological methods. The presumptive positive colonies were confirmed by Matrix-Assisted Laser Desorption Ionization-Time-of-Flight (MALDi-ToF). Polymerase chain reaction (PCR) was used to detect virulence genes, including invA and spvC. A slide agglutination test according to the White-Kauffmann-Le Minor scheme was employed to identify the serovars of the NTS isolates. The Kirby-Bauer disk diffusion method was used to assess the antimicrobial susceptibility patterns. Of the processed samples (362), 28 (7.7%) NTS isolates were detected. When distributed among samples, the proportions were 11.9%, 10.5%, 10.3%, 5.2%, 4.3%, and 1.7% among cows' feces, dairy farm sewage, pooled raw milk, milk container swabs, milkers' stool, and milkers' hand swab samples, respectively. Six serovars were detected with the dominancy of S. Uganda (39.3%), followed by S. enterica subsp. diarizonae (25.0%) and S. Typhimurium (21.4%). Among the 28 NTS isolates, 100% and 21.4% had the virulence genes invA and spvC, respectively. The susceptibility profile showed that 89.3% of the NTS isolates were resistant to at least one antimicrobial agent and 46.4% were resistant to three or more classes of antimicrobials (multidrug-resistant). Among antimicrobials, isolates were highly resistant to ampicillin (57.1%), followed by tetracycline (42.9%) and chloramphenicol (35.7%). On the other hand, the NTS isolates were 100%, 96.4%, and 96.4% susceptible to ceftriaxone, azithromycin, and norfloxacin, respectively. In conclusion, we detected NTS from humans, dairy cows, raw milk, dairy utensils, and the environment (sewage), showing the potential of the human-dairy farm-environment nexus in the NTS circulation. These further highlight that the interface is a good point of intervention in the control and prevention of NTS infection. The susceptibility profiles of the isolate necessitate interventions including the prudent use of the antimicrobials.

摘要

非伤寒沙门氏菌(NTS)是一种人畜共患病病原体,在世界范围内对公共卫生和经济造成了巨大影响。疾病的严重程度主要与涉及的血清型、毒力基因和抗生素耐药性(AMR)模式有关。然而,在埃塞俄比亚西北部的人与乳制品界面分离出的 NTS 中,有关血清型、毒力基因和 AMR 的数据很少。因此,本研究调查了该地区 NTS 分离株的血清型、常见毒力基因和 AMR 模式。该研究于 2022 年 6 月至 2023 年 8 月在随机选择的 58 个奶牛场进行。共处理了 362 个样本,采用标准细菌学方法检测 NTS。采用基质辅助激光解吸电离飞行时间(MALDi-ToF)对疑似阳性菌落进行确认。采用聚合酶链反应(PCR)检测毒力基因,包括 invA 和 spvC。采用 White-Kauffmann-Le Minor 方案的玻片凝集试验鉴定 NTS 分离株的血清型。采用 Kirby-Bauer 纸片扩散法评估抗菌药物敏感性模式。在所处理的样本(362 个)中,检测到 28 株(7.7%)NTS 分离株。在分布于各样本时,牛粪便、奶牛场污水、混合生牛乳、奶桶拭子、挤奶工粪便和挤奶工手部拭子样本中的比例分别为 11.9%、10.5%、10.3%、5.2%、4.3%和 1.7%。共检测到 6 种血清型,其中以乌干达血清型(S. Uganda)为主,占 39.3%,其次是迪阿里宗纳血清型(S. enterica subsp. diarizonae)和肠炎血清型(S. Typhimurium),分别占 25.0%和 21.4%。在 28 株 NTS 分离株中,100%和 21.4%分别携带 invA 和 spvC 毒力基因。药敏谱显示,89.3%的 NTS 分离株至少对一种抗菌药物耐药,46.4%的分离株对三种或三种以上类别的抗菌药物耐药(多药耐药)。在抗菌药物中,分离株对氨苄西林的耐药率最高(57.1%),其次是四环素(42.9%)和氯霉素(35.7%)。另一方面,NTS 分离株对头孢曲松、阿奇霉素和诺氟沙星的敏感性分别为 100%、96.4%和 96.4%。综上所述,我们从人与奶牛、生牛乳、乳制品和环境(污水)中检测到 NTS,表明人与奶牛场-环境的接触点在 NTS 的传播中具有潜在作用。这进一步强调了该接触点是控制和预防 NTS 感染的良好干预点。分离株的药敏谱需要进行干预,包括谨慎使用抗菌药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/582c/11578527/44906c0b9809/pntd.0012646.g001.jpg

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