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全面系统分析二氢硫辛酰胺 S-乙酰基转移酶作为泛癌和神经胶质瘤的新型预后生物标志物。

A comprehensive and systematic analysis of Dihydrolipoamide S-acetyltransferase as a novel prognostic biomarker in pan-cancer and glioma.

机构信息

Department of Hematology, West China Hospital, Sichuan University, Chengdu, 610041, China.

出版信息

Oncol Res. 2024 Nov 13;32(12):1903-1919. doi: 10.32604/or.2024.048138. eCollection 2024.

Abstract

BACKGROUND

Dihydrolipoamide S-acetyltransferase () is a subunit of the pyruvate dehydrogenase complex (PDC), a rate-limiting enzyme complex, that can participate in either glycolysis or the tricarboxylic acid cycle (TCA). However, the pathogenesis is not fully understood. We aimed to perform a more systematic and comprehensive analysis of in the occurrence and progression of tumors, and to investigate its function in patients' prognosis and immunotherapy.

METHODS

The differential expression, diagnosis, prognosis, genetic and epigenetic alterations, tumor microenvironment, stemness, immune infiltration cells, function enrichment, single-cell analysis, and drug response across cancers were conducted based on multiple computational tools. Additionally, we validated its carcinogenic effect and possible mechanism in glioma cells.

RESULTS

We exhibited that expression was increased in most tumors, especially in glioma, and affected the survival of tumor patients. was related to RNA modification genes, DNA methylation, immune infiltration, and immune infiltration cells, including CD4+ T cells, CD8+ T cells, Tregs, and cancer-associated fibroblasts. Single-cell analysis displayed that might regulate cancer by mediating angiogenesis, inflammation, and stemness. Enrichment analysis revealed that might take part in the cell cycle pathway. Increased expression of leads tumor cells to be more resistant to many kinds of compounds, including PI3Kβ inhibitors, PKC inhibitors, HSP90 inhibitors, and MEK inhibitors. In addition, glioma cells with silence inhibited proliferation, migration, and invasion ability, and promoted cell apoptosis.

CONCLUSION

We conducted a comprehensive analysis of in the occurrence and progression of tumors, and its possible functions and mechanisms. is a potential diagnostic, prognostic, and immunotherapeutic biomarker for cancer patients.

摘要

背景

二氢硫辛酰胺 S-乙酰基转移酶()是丙酮酸脱氢酶复合物(PDC)的一个亚基,PDC 是一种限速酶复合物,可以参与糖酵解或三羧酸循环(TCA)。然而,其发病机制尚不完全清楚。我们旨在更系统、全面地分析在肿瘤发生和发展中的作用,并研究其在患者预后和免疫治疗中的功能。

方法

基于多种计算工具,对在癌症中的差异表达、诊断、预后、遗传和表观遗传改变、肿瘤微环境、干性、免疫浸润细胞、功能富集、单细胞分析和药物反应进行了分析。此外,我们还验证了其在神经胶质瘤细胞中的致癌作用及其可能的机制。

结果

我们表明在大多数肿瘤中,尤其是在神经胶质瘤中,的表达增加,并影响肿瘤患者的生存。与 RNA 修饰基因、DNA 甲基化、免疫浸润和免疫浸润细胞(包括 CD4+T 细胞、CD8+T 细胞、Tregs 和癌相关成纤维细胞)有关。单细胞分析表明,可能通过调节血管生成、炎症和干性来调节癌症。富集分析表明,可能参与细胞周期途径。增加的表达使肿瘤细胞对包括 PI3Kβ 抑制剂、PKC 抑制剂、HSP90 抑制剂和 MEK 抑制剂在内的多种化合物更具耐药性。此外,沉默的神经胶质瘤细胞抑制增殖、迁移和侵袭能力,并促进细胞凋亡。

结论

我们对在肿瘤发生和发展中的作用及其可能的功能和机制进行了全面分析。是癌症患者潜在的诊断、预后和免疫治疗生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aaa9/11576973/1b747e765533/OncolRes-32-48138-f001.jpg

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