Deveryshetty Jaigeeth, Mistry Ayush, Pangeni Sushil, Ghoneim Mohamed, Tokmina-Lukaszewska Monica, Kaushik Vikas, Taddei Angela, Ha Taekjip, Bothner Brian, Antony Edwin
Department of Biochemistry and Molecular Biology, St. Louis University School of Medicine, St. Louis, MO 63104.
Department of Biophysics, Johns Hopkins University, Baltimore, MD 21205.
bioRxiv. 2024 Nov 7:2024.11.07.622519. doi: 10.1101/2024.11.07.622519.
Homologous recombination (HR) repairs double-stranded DNA breaks (DSBs). The DSBs are resected to yield single-stranded DNA (ssDNA) that are coated by Replication Protein A (RPA). Rad51 is a recombinase and catalyzes strand invasion and the search for homology. However, it binds to ssDNA with lower affinity than RPA. Thus, mediator proteins such as Rad52/BRCA2 are required to promote Rad51 binding to RPA-coated ssDNA, but the underlying mechanisms remain poorly understood. Rad52 interacts with Rad51 through two distinct binding modes. We here uncover that the Rad51-binding site in the disordered C-terminus of Rad52 (mode-1) sorts polydisperse Rad51 into discrete monomers. The second Rad51 binding site resides in the ordered N-terminal ring of Rad52 (mode-2), but this interaction occurs at only one position on the ring. In single molecule confocal fluorescence microscopy combined with optical tweezer analysis, we directly visualize filament formation using fluorescent-Rad51. Rad52 catalyzes Rad51 loading onto RPA-coated ssDNA, with a distinct preference for junctions, but no filament growth is observed. Deletion of the C-terminus of Rad52 results in loss of Rad51 sorting and abrogates Rad51 binding to RPA-coated DNA. While BRCA2 and Rad52 are structurally unrelated, many of these functional features are conserved. We describe a concerted mechanism for mediator proteins in promoting HR.
同源重组(HR)修复双链DNA断裂(DSB)。DSB被切除以产生单链DNA(ssDNA),其被复制蛋白A(RPA)包被。Rad51是一种重组酶,催化链侵入并寻找同源性。然而,它与ssDNA的结合亲和力低于RPA。因此,需要诸如Rad52/BRCA2等介导蛋白来促进Rad51与RPA包被的ssDNA结合,但其潜在机制仍知之甚少。Rad52通过两种不同的结合模式与Rad51相互作用。我们在此发现,Rad52无序C末端中的Rad51结合位点(模式1)将多分散的Rad51分类为离散的单体。第二个Rad51结合位点位于Rad52有序的N末端环中(模式2),但这种相互作用仅发生在环上的一个位置。在单分子共聚焦荧光显微镜结合光镊分析中,我们使用荧光Rad51直接观察到细丝形成。Rad52催化Rad51加载到RPA包被的ssDNA上,对连接点有明显偏好,但未观察到细丝生长。删除Rad52的C末端会导致Rad51分选丧失,并消除Rad51与RPA包被的DNA的结合。虽然BRCA2和Rad52在结构上不相关,但许多这些功能特征是保守的。我们描述了介导蛋白促进HR的协同机制。