Kivimaki Sarah E, Dempsey Samantha, Camper Collette, Tani Julia M, Hicklin Ian K, Blaby-Haas Crysten E, Brown Anne M, Melville Stephen B
Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA.
University Libraries and Department of Biochemistry, Virginia Tech, Blacksburg, VA 24061, USA.
bioRxiv. 2025 Mar 17:2024.11.04.621531. doi: 10.1101/2024.11.04.621531.
is a Gram-positive, anaerobic, spore-forming, bacterial pathogen of humans and animals. also produces type IV pili (T4P) and has two complete sets of T4P-associated genes, one of which has been shown to produce surface pili needed for cell adherence. One hypothesis about the second set of T4P genes is that they comprise a system analogous to the type II secretion systems (TTSS) found in Gram-negative bacteria, which is used to export folded proteins from the periplasm through the outer membrane to the extracellular environment. Gram-positive bacteria have a similar secretion barrier in the thick peptidoglycan (PG) layer, which blocks secretion of folded proteins >25 kD. To determine if the T4P-associated genes comprise a Gram-positive TTSS, the secretome of mutants lacking type IV pilins were examined and a single protein, a von Willebrand A domain containing protein, BsaC (CPE0517), was identified as being dependent on pilin PilA3 for secretion. The gene is in an operon with genes encoding a SipW signal peptidase and two putative biofilm matrix proteins BsaA and BsaB, both of which have remote homology to biofilm protein TasA. Since BsaA forms long oligomers that are secreted, we analyzed BsaA monomer interactions with modeling. These models projected that the monomers formed isopeptide bonds as part of a donor strand exchange process, in which an N-terminal disordered loop of one monomer intercalates into a beta sheet structure of an adjacent monomer and reforms into a beta sheet with subsequent isopeptide bond formation. Mutations in residues predicted to form the isopeptide bonds led to loss of oligomerization, supporting an exchange and lock mechanism. Phylogenetic analysis showed the BsaA family of proteins are widespread among bacteria and archaea but only a subset is predicted to form isopeptide bonds.
是一种革兰氏阳性、厌氧、产芽孢的人和动物细菌病原体。它还产生IV型菌毛(T4P),并拥有两套完整的与T4P相关的基因,其中一套已被证明能产生细胞黏附所需的表面菌毛。关于第二套T4P基因的一种假设是,它们构成了一个类似于革兰氏阴性细菌中发现的II型分泌系统(TTSS)的系统,该系统用于将周质中折叠的蛋白质通过外膜输出到细胞外环境。革兰氏阳性细菌在厚厚的肽聚糖(PG)层中有类似的分泌屏障,该屏障会阻止大于25 kD的折叠蛋白质的分泌。为了确定与T4P相关的基因是否构成革兰氏阳性TTSS,研究了缺乏IV型菌毛蛋白的突变体的分泌蛋白组,一种单一蛋白质,即含有血管性血友病因子A结构域的蛋白质BsaC(CPE0517),被确定为其分泌依赖于菌毛蛋白PilA3。该基因位于一个操纵子中,与编码SipW信号肽酶的基因以及两种假定的生物膜基质蛋白BsaA和BsaB在一起,这两种蛋白与生物膜蛋白TasA都有较远的同源性。由于BsaA形成可分泌的长寡聚体,我们用建模分析了BsaA单体的相互作用。这些模型预测,单体形成异肽键作为供体链交换过程的一部分,其中一个单体的N端无序环插入相邻单体的β折叠结构中,并重新形成β折叠,随后形成异肽键。预测形成异肽键的残基发生突变会导致寡聚化丧失,这支持了一种交换和锁定机制。系统发育分析表明,BsaA蛋白家族在细菌和古细菌中广泛存在,但只有一个子集被预测会形成异肽键。