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一项综合多组学分析确定了南极洲独特光照环境下昼夜节律和睡眠中断的新型调节因子。

An integrated multi-omics analysis identifies novel regulators of circadian rhythm and sleep disruptions under unique light environment in Antarctica.

作者信息

Liu Shiying, Wang Jianan, Tian Xuan, Zhang Zhigang, Wang Liping, Xiong Yanlei, Liu Xinyuan, Xie Yalei, Wu Xiaopei, Xu Chengli

机构信息

Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, Beijing, China.

The First Affiliated Hospital of Dalian Medical University, Dalian, Liaoning, China.

出版信息

Mol Psychiatry. 2025 Jun;30(6):2395-2406. doi: 10.1038/s41380-024-02844-7. Epub 2024 Nov 26.

Abstract

Light is the dominant zeitgeber for biological clocks, and its regulatory mechanism for sleep-wake activity has been extensively studied. However, the molecular pathways through which the unique Antarctic light environment, with polar days in summer and polar nights in winter, affects human sleep and circadian rhythm remain largely unidentified, although previous studies have observed delayed circadian rhythm and sleep disruptions among expeditioners during polar nights. In this study, we conducted comprehensive dynamic research on the expeditioners residing in Antarctica for over one year. By integrating the phenotypic changes with multi-omics data, we tried to identify the novel candidate regulators and their correlation networks involved in circadian and sleep disorders under abnormal light exposure. We found that during the austral winter, expeditioners exhibited delayed bedtime and getting up time, reduced sleep efficiency, and increased sleep fragmentation. Meanwhile, serum dopamine metabolite levels significantly increased, while serotonin metabolites and antioxidants decreased. These changes were accompanied by altered expression of genes and proteins associated with neural functions, cellular activities, transcriptional regulation, and so on. Through the correlation and causal mediation analysis, we identified several potential pathways modulating human sleep-wake activity, involving genes and proteins related to neural function, glucose metabolism, extracellular matrix homeostasis, and some uncharacterized lncRNAs. Based on the identified causal mediators, LASSO regression analysis further revealed a novel candidate gene, Shisa Family Member 8 (SHISA8), as a potential key regulatory hub in this process. These findings shed light on the probable molecular mechanisms of sleep disorders in Antarctica and suggest SHISA8 as a novel candidate target for medical intervention in sleep disorders under unique light environments.

摘要

光作为生物钟的主要授时因子,其对睡眠 - 觉醒活动的调节机制已得到广泛研究。然而,尽管先前的研究已经观察到极地夜间探险者的昼夜节律延迟和睡眠中断,但在夏季出现极昼、冬季出现极夜这种独特的南极光照环境影响人类睡眠和昼夜节律的分子途径在很大程度上仍不明确。在本研究中,我们对在南极洲居住一年以上的探险者进行了全面的动态研究。通过将表型变化与多组学数据相结合,我们试图确定在异常光照下参与昼夜节律和睡眠障碍的新型候选调节因子及其相关网络。我们发现,在南极冬季,探险者表现出就寝时间和起床时间延迟、睡眠效率降低以及睡眠碎片化增加。同时,血清多巴胺代谢物水平显著升高,而血清素代谢物和抗氧化剂水平降低。这些变化伴随着与神经功能、细胞活动、转录调控等相关的基因和蛋白质表达的改变。通过相关性和因果中介分析,我们确定了几条调节人类睡眠 - 觉醒活动的潜在途径,涉及与神经功能、葡萄糖代谢、细胞外基质稳态相关的基因和蛋白质以及一些未表征的长链非编码RNA。基于确定的因果中介因子,LASSO回归分析进一步揭示了一个新的候选基因——Shisa家族成员8(SHISA8),作为这一过程中潜在的关键调节枢纽。这些发现揭示了南极洲睡眠障碍可能的分子机制,并表明SHISA8作为在独特光照环境下睡眠障碍医学干预的新候选靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c21a/12092249/be57b43e0511/41380_2024_2844_Fig1_HTML.jpg

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