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蛋白质冠层模拟研究的最新进展

Recent Advances in Simulation Studies on the Protein Corona.

作者信息

Lee Hwankyu

机构信息

Department of Chemical Engineering, Dankook University, Yongin-si 16890, Republic of Korea.

出版信息

Pharmaceutics. 2024 Nov 6;16(11):1419. doi: 10.3390/pharmaceutics16111419.

Abstract

When flowing through the blood stream, drug carriers such as nanoparticles encounter hundreds of plasma proteins, forming a protein layer on the nanoparticle surface, known as the "protein corona". Since the protein corona influences the size, shape, and surface properties of nanoparticles, it can modulate their circulating lifetime, cytotoxicity, and targeting efficiency. Therefore, understanding the mechanism of protein corona formation at the atomic scale is crucial, which has become possible due to advances in computer power and simulation methodologies. This review covers the following topics: (1) the structure, dynamics, and composition of protein corona on nanoparticles; (2) the effects of protein concentration and ionic strength on protein corona formation; (3) the effects of particle size, morphology, and surface properties on corona formation; (4) the interactions among lipids, membranes, and nanoparticles with the protein corona. For each topic, mesoscale, coarse-grained, and all-atom molecular dynamics simulations since 2020 are discussed. These simulations not only successfully reproduce experimental observations but also provide physical insights into the protein corona formation. In particular, these simulation findings can be applied to manipulate the formation of a protein corona that can target specific cells, aiding in the rational design of nanomedicines for drug delivery applications.

摘要

当诸如纳米颗粒之类的药物载体在血流中流动时,它们会遇到数百种血浆蛋白,在纳米颗粒表面形成一层蛋白质层,即所谓的“蛋白质冠”。由于蛋白质冠会影响纳米颗粒的大小、形状和表面性质,它可以调节纳米颗粒的循环寿命、细胞毒性和靶向效率。因此,在原子尺度上理解蛋白质冠的形成机制至关重要,而由于计算机性能和模拟方法的进步,这已成为可能。本综述涵盖以下主题:(1)纳米颗粒上蛋白质冠的结构、动力学和组成;(2)蛋白质浓度和离子强度对蛋白质冠形成的影响;(3)颗粒大小、形态和表面性质对冠形成的影响;(4)脂质、膜和纳米颗粒与蛋白质冠之间的相互作用。对于每个主题,都讨论了自2020年以来的介观、粗粒度和全原子分子动力学模拟。这些模拟不仅成功再现了实验观察结果,还为蛋白质冠的形成提供了物理见解。特别是,这些模拟结果可用于操纵能够靶向特定细胞的蛋白质冠的形成,有助于合理设计用于药物递送应用的纳米药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ded2/11597855/6315914ec1c8/pharmaceutics-16-01419-g001.jpg

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