Weissmann Florian, Greiwe Julia F, Pühringer Thomas, Eastwood Evelyn L, Couves Emma C, Miller Thomas C R, Diffley John F X, Costa Alessandro
Chromosome Replication Laboratory, The Francis Crick Institute, London, UK.
Macromolecular Machines Laboratory, The Francis Crick Institute, London, UK.
Nature. 2024 Dec;636(8042):499-508. doi: 10.1038/s41586-024-08263-6. Epub 2024 Nov 27.
Eukaryotic DNA replication begins with the loading of the MCM replicative DNA helicase as a head-to-head double hexamer at origins of DNA replication. Our current understanding of how the double hexamer is assembled by the origin recognition complex (ORC), CDC6 and CDT1 comes mostly from budding yeast. Here we characterize human double hexamer (hDH) loading using biochemical reconstitution and cryo-electron microscopy with purified proteins. We show that the human double hexamer engages DNA differently from the yeast double hexamer (yDH), and generates approximately five base pairs of underwound DNA at the interface between hexamers, as seen in hDH isolated from cells. We identify several differences from the yeast double hexamer in the order of factor recruitment and dependencies during hDH assembly. Unlike in yeast, the ORC6 subunit of the ORC is not essential for initial MCM recruitment or hDH loading, but contributes to an alternative hDH assembly pathway that requires an intrinsically disordered region in ORC1, which may work through a MCM-ORC intermediate. Our work presents a detailed view of how double hexamers are assembled in an organism that uses sequence-independent replication origins, provides further evidence for diversity in eukaryotic double hexamer assembly mechanisms, and represents a first step towards reconstitution of DNA replication initiation with purified human proteins.
真核生物的DNA复制始于MCM复制性DNA解旋酶以头对头双六聚体的形式加载到DNA复制起点。我们目前对双六聚体如何由起始识别复合物(ORC)、CDC6和CDT1组装而成的理解主要来自芽殖酵母。在这里,我们使用生化重建和冷冻电子显微镜结合纯化蛋白来表征人类双六聚体(hDH)的加载过程。我们发现人类双六聚体与酵母双六聚体(yDH)结合DNA的方式不同,并且在六聚体之间的界面处产生大约五个碱基对的解旋DNA,这与从细胞中分离出的hDH情况一致。我们确定了在hDH组装过程中,因子招募顺序和依赖性方面与酵母双六聚体的几个差异。与酵母不同,ORC的ORC6亚基对于初始MCM招募或hDH加载不是必需的,但有助于一种需要ORC1中内在无序区域的替代hDH组装途径,该途径可能通过MCM-ORC中间体起作用。我们的工作详细展示了在使用与序列无关的复制起点的生物体中双六聚体是如何组装的,为真核生物双六聚体组装机制的多样性提供了进一步证据,并且代表了用纯化的人类蛋白重建DNA复制起始的第一步。