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基于谱系的指猴交叉和非交叉图谱()。

A pedigree-based map of crossovers and non-crossovers in aye-ayes ().

作者信息

Versoza Cyril J, Lloret-Villas Audald, Jensen Jeffrey D, Pfeifer Susanne P

机构信息

Center for Evolution and Medicine, School of Life Sciences, Arizona State University, Tempe, AZ, USA.

出版信息

bioRxiv. 2024 Nov 11:2024.11.08.622675. doi: 10.1101/2024.11.08.622675.

Abstract

Gaining a better understanding of rates and patterns of meiotic recombination is crucial for improving evolutionary genomic modelling, with applications ranging from demographic to selective inference. Although previous research has provided important insights into the landscape of crossovers in humans and other haplorrhines, our understanding of both the considerably more common outcome of recombination (i.e., non-crossovers) as well as the landscapes in more distantly-related primates (i.e., strepsirrhines) remains limited owing to difficulties associated with both the identification of non-crossover tracts as well as species sampling. Thus, in order to elucidate recombination patterns in this under-studied branch of the primate clade, we here characterize crossover and non-crossover landscapes in aye-ayes utilizing whole-genome sequencing data from six three-generation pedigrees as well as three two-generation multi-sibling families, and in so doing provide novel insights into this important evolutionary process shaping genomic diversity in one of the world's most critically endangered primate species.

摘要

更好地理解减数分裂重组的速率和模式对于改进进化基因组建模至关重要,其应用范围从人口统计学到选择性推断。尽管先前的研究已经对人类和其他灵长类动物的交叉景观提供了重要见解,但由于识别非交叉片段以及物种采样方面的困难,我们对重组中更为常见的结果(即非交叉)以及关系更远的灵长类动物(即狐猴)的景观的理解仍然有限。因此,为了阐明灵长类进化枝中这个研究不足的分支中的重组模式,我们利用来自六个三代家系以及三个二代多兄弟姐妹家庭的全基因组测序数据,对指猴的交叉和非交叉景观进行了表征,并在此过程中为这一塑造世界上最濒危灵长类物种之一基因组多样性的重要进化过程提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f00/11601232/5a20ce6dc705/nihpp-2024.11.08.622675v1-f0001.jpg

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