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Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches.抗原呈递性癌症相关成纤维细胞微环境的单细胞分辨率空间分析。
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引用本文的文献

1
CSearch: chemical space search via virtual synthesis and global optimization.CSearch:通过虚拟合成和全局优化进行化学空间搜索。
J Cheminform. 2024 Dec 5;16(1):137. doi: 10.1186/s13321-024-00936-8.

抗原呈递性癌症相关成纤维细胞微环境的单细胞分辨率空间分析。

Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches.

作者信息

Chen Xiongfeng, Zhou Zhuan, Yazgan Zeynep, Xie Luyu, Rossi Francesca, Liu Yang, Zhang Bo, Polanco Patricio M, Zeh Herbert J, Kim Alex C, Huang Huocong

出版信息

bioRxiv. 2024 Nov 17:2024.11.15.623232. doi: 10.1101/2024.11.15.623232.

DOI:10.1101/2024.11.15.623232
PMID:39605724
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11601292/
Abstract

Recent studies have identified a unique subtype of cancer-associated fibroblasts (CAFs) termed antigen-presenting CAFs (apCAFs), which remain the least understood CAF subtype. To gain a comprehensive understanding of the origin and function apCAFs, we construct a fibroblast molecular atlas across 14 types of solid tumors. Our integration study unexpectedly reveals two distinct apCAF lineages present in most cancer types: one associated with mesothelial-like cells and the other with fibrocytes. Using a high-resolution single-cell spatial imaging platform, we characterize the spatial niches of these apCAF lineages. We find that mesothelial-like apCAFs are located near cancer cells, while fibrocyte-like apCAFs are associated with tertiary lymphoid structures. Additionally, we discover that both apCAF lineages can up-regulate the secreted protein SPP1, which facilitates primary tumor formation and peritoneal metastasis. Taken together, this study offers an unprecedented resolution in analyzing apCAF lineages and their spatial niches.

摘要

最近的研究发现了一种独特的癌症相关成纤维细胞(CAF)亚型,称为抗原呈递CAF(apCAF),这仍然是人们了解最少的CAF亚型。为了全面了解apCAF的起源和功能,我们构建了一个涵盖14种实体瘤类型的成纤维细胞分子图谱。我们的整合研究意外地揭示了大多数癌症类型中存在两种不同的apCAF谱系:一种与间皮样细胞相关,另一种与纤维细胞相关。使用高分辨率单细胞空间成像平台,我们对这些apCAF谱系的空间生态位进行了表征。我们发现间皮样apCAF位于癌细胞附近,而纤维细胞样apCAF与三级淋巴结构相关。此外,我们发现两种apCAF谱系都可以上调分泌蛋白SPP1,这有助于原发性肿瘤形成和腹膜转移。综上所述,这项研究在分析apCAF谱系及其空间生态位方面提供了前所未有的分辨率。