Li Yuxin, Chen Jiahao, Yao Hang, Xu Xiaogang, Zheng Xianglong, Wang Yu, Wang Wanchun
Graduate School of Jiangxi University of Traditional Chinese Medicine, Nanchang, China.
School of Basic Medical Sciences, Zhejiang Chinese Medical University, Hangzhou, China.
Front Genet. 2024 Nov 15;15:1430671. doi: 10.3389/fgene.2024.1430671. eCollection 2024.
Lipoma, a benign tumor derived from mesenchymal tissue, significantly affects patients' physical and psychological wellbeing. Increasing evidence points to a strong link between the gut microbiome (GM) and lipoma incidence. This study utilizes Mendelian Randomization (MR) to assess the potential causal relationships between the GM and lipoma development.
We conducted a two-sample MR analysis using genome-wide association study (GWAS) data from MiBioGen and FinnGen to explore the causal relationship between GM and lipoma. The GM dataset included 18,340 participants with 14,587 single nucleotide polymorphisms (SNPs), while the lipoma dataset comprised 412,181 participants with 21,306,349 SNPs. We employed 5 MR methods: Inverse Variance Weighted (IVW), Weighted Median, Simple Mode, MR-Egger, and Weighted Mode. Additional assessments included Cochran's Q test for result heterogeneity, PRESSO analysis for horizontal pleiotropy, and sensitivity analyses through scatter plots, leave-one-out analyses, funnel plots, and forest plots.
The IVW method identified 18 gene predictors trans-genus associated with lipoma risk. Protective effects against benign lipoma (BL) were observed in the Eubacterium rectale group, Desulfovibrio, Ruminococcus1, sensu stricto1, and Lachnospiraceae UCG001; conversely, Lachnospiraceae UCG008 was linked to increased BL risk. Desulfovibrio provided protection against TS-BL; however, the Family XIII AD3011 group, Eubacterium coprostanoligenes group, Lachnospiraceae NK4A136 group, and Parasutterella were associated with an increased TS-BL risk. The innocuum group, Eubacterium rectale group, Anaerotruncus, Ruminiclostridium6, and Lachnospiraceae UCG001 offered protection against LS-BL, while Lachnospiraceae UCG008 was linked to an increased LS-BL risk. The Eubacterium brachy group, Odoribacter, Butyricimonas, Subdoligranulum, and sensu stricto1 were protective against HFNS-BL; Ruminococcaceae UCG005 was associated with an increased HFNS-BL risk.
Compared to malignant tumors, research on lipomas has been relatively limited. This study, through MR analysis, provided new evidence of a causal relationship between specific GM and the development of lipomas. Certain gut bacterial species may act as protective or harmful factors in lipoma formation, offering new avenues for future treatment strategies. However, additional research is required to unravel the complexity of how GM influences the pathogenesis of lipomas.
脂肪瘤是一种源自间充质组织的良性肿瘤,严重影响患者的身心健康。越来越多的证据表明肠道微生物群(GM)与脂肪瘤发病率之间存在紧密联系。本研究利用孟德尔随机化(MR)来评估GM与脂肪瘤发生之间的潜在因果关系。
我们使用来自MiBioGen和FinnGen的全基因组关联研究(GWAS)数据进行了两样本MR分析,以探索GM与脂肪瘤之间的因果关系。GM数据集包括18340名参与者和14587个单核苷酸多态性(SNP),而脂肪瘤数据集包含412181名参与者和21306349个SNP。我们采用了5种MR方法:逆方差加权(IVW)、加权中位数、简单模式、MR-Egger和加权模式。额外的评估包括用于结果异质性的Cochran's Q检验、用于水平多效性的PRESSO分析,以及通过散点图、留一法分析、漏斗图和森林图进行的敏感性分析。
IVW方法确定了18个跨属基因预测因子与脂肪瘤风险相关。在直肠真杆菌组、脱硫弧菌属、瘤胃球菌1(狭义)和毛螺菌科UCG001中观察到对良性脂肪瘤(BL)的保护作用;相反,毛螺菌科UCG008与BL风险增加有关。脱硫弧菌属对TS-BL有保护作用;然而,XIII AD3011家族组、粪甾醇真杆菌组、毛螺菌科NK4A136组和副萨特氏菌属与TS-BL风险增加有关。无害杆菌组、直肠真杆菌组、厌氧短杆菌属、瘤胃梭菌6和毛螺菌科UCG001对LS-BL有保护作用,而毛螺菌科UCG008与LS-BL风险增加有关。短真杆菌组、气味杆菌属、丁酸单胞菌属、嗜胨菌属和狭义瘤胃球菌1对HFNS-BL有保护作用;瘤胃球菌科UCG005与HFNS-BL风险增加有关。
与恶性肿瘤相比,对脂肪瘤的研究相对有限。本研究通过MR分析,为特定GM与脂肪瘤发生之间的因果关系提供了新证据。某些肠道细菌物种可能在脂肪瘤形成中充当保护或有害因素,为未来的治疗策略提供了新途径。然而,需要更多的研究来阐明GM如何影响脂肪瘤发病机制的复杂性。