Rasouli Saeid, Dakkali Mohammad Sedigh, Ghazvini Azim, Azarbad Reza, Asani Mahdi, Mirzaasgari Zahra, Arish Mohammed
Five Senses Health Research Institute, School of Medicine, Hazrat-e Rasool General Hospital, Iran University of Medical Sciences, Tehran, Iran.
Department of Ophthalmology, School of Medicine, Al Zahra Eye Hospital, Zahedan University of Medical Sciences, Zahedan, Iran.
PLoS One. 2024 Dec 2;19(12):e0309702. doi: 10.1371/journal.pone.0309702. eCollection 2024.
Optic neuritis (ON) can be an initial clinical presentation of multiple sclerosis This study aims to provide a practical predictive model for identifying at-risk ON patients in developing MS.
We utilized data from the Optic Neuritis Treatment Trial study, which enrolled 457 patients aged from 18 to 46 years, all diagnosed with acute ON. These patients underwent up to 15 years of neurological and ophthalmologic examinations and imaging. The selection of variables for the developing model was based on clinical importance and statistical significance, and any missing values were appropriately addressed. We developed a Decision Tree (DT) classifier as the primary model and manually tuned its hyperparameters for optimal performance. We employed SHapley Additive exPlanations (SHAP) for feature importance evaluation. All analysis was performed using Python version 3.10.9 and its associated libraries.
A total of 388 patients completed the study, of which 154 developed clinically definite multiple sclerosis (CDMS). It was observed that 61% of patients with magnetic resonance imaging (MRI) lesions developed CDMS. The final variables selected for analysis were MRI lesions, neurologic history, ON type, gender, and visual field mean deviation. The DT model achieved an accuracy of 70.1% during cross-validation and 69.1% on the test set, with an area under the curve of 74.9% and 71.7%, respectively. Comparative analysis of DT with other models showed similar performance. SHAP analysis revealed that MRI lesions and ON type emerged as the two most significant features, with relative importance of 61% and 18%, respectively.
The decision tree model, with satisfactory performance, effectively stratifies patients, based on baseline findings and offers valuable insights for informed decision-making by physicians.
视神经炎(ON)可能是多发性硬化症的初始临床表现。本研究旨在提供一种实用的预测模型,用于识别有发展为多发性硬化症风险的视神经炎患者。
我们利用了视神经炎治疗试验研究的数据,该研究纳入了457名年龄在18至46岁之间、均被诊断为急性视神经炎的患者。这些患者接受了长达15年的神经学和眼科检查及影像学检查。用于开发模型的变量选择基于临床重要性和统计学意义,并对任何缺失值进行了适当处理。我们开发了一个决策树(DT)分类器作为主要模型,并手动调整其超参数以实现最佳性能。我们采用SHapley加性解释(SHAP)进行特征重要性评估。所有分析均使用Python 3.10.9版本及其相关库进行。
共有388名患者完成了研究,其中154名发展为临床确诊的多发性硬化症(CDMS)。观察到有磁共振成像(MRI)病变的患者中有61%发展为CDMS。最终选择进行分析的变量是MRI病变、神经病史、视神经炎类型、性别和视野平均偏差。DT模型在交叉验证期间的准确率为70.1%,在测试集上的准确率为69.1%,曲线下面积分别为74.9%和71.7%。DT与其他模型的比较分析显示性能相似。SHAP分析表明,MRI病变和视神经炎类型是两个最显著的特征,相对重要性分别为61%和18%。
决策树模型性能令人满意,基于基线检查结果有效地对患者进行分层,并为医生的明智决策提供了有价值的见解。