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色谱和质谱引导下的肽抗生素发现及其生物活性研究

Chromatographic and mass spectroscopic guided discovery of peptaibiotics and their bioactivity.

作者信息

Setargie Adigo, Wang Chen, Zhang Liwen, Xu Yuquan

机构信息

Biotechnology Research Institute, The Chinese Academy of Agricultural Sciences, 12 Zhongguancun South Street, Beijing 100081, China.

Institute of Biotechnology, Bahir Dar University, P.O. Box. 79, Bahir Dar, Ethiopia.

出版信息

Eng Microbiol. 2023 Dec 16;4(2):100135. doi: 10.1016/j.engmic.2023.100135. eCollection 2024 Jun.

DOI:10.1016/j.engmic.2023.100135
PMID:39629330
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11611045/
Abstract

Peptaibiotics are linear or cyclic peptide antibiotics characterized by the non-proteinogenic amino acid, alpha-aminoisobutyric acid. They exhibit a wide range of bioactivity against various pathogens. This report presents a comprehensive review of analytical methods for cultivation, production, isolation, screening, purification, and characterization of peptaibiotics, along with their bioactivity. Numerous techniques are currently available for each step, and we focus on describing the most commonly used and recently developed chromatographic and spectroscopic techniques. Investigating peptaibiotics requires efficient culture media, growth conditions, and isolation and purification techniques. The combination of chromatographic and spectroscopic tools offers a better opportunity for characterizing and identifying peptaibiotics. The evaluation of the chemical and biological properties of this compound has also been explored concerning its potential application in pharmaceutical and other industries. This review aims to summarize available data on the techniques and tools used to screen and purify peptaibiotics from fungi and bioactivity against various pathogens.

摘要

短杆菌肽类是一类线性或环状肽抗生素,其特征在于含有非蛋白质氨基酸α-氨基异丁酸。它们对多种病原体具有广泛的生物活性。本报告全面综述了短杆菌肽类的培养、生产、分离、筛选、纯化和表征的分析方法,以及它们的生物活性。目前每个步骤都有许多技术可用,我们重点描述最常用和最近开发的色谱和光谱技术。研究短杆菌肽类需要高效的培养基、生长条件以及分离和纯化技术。色谱和光谱工具的结合为表征和鉴定短杆菌肽类提供了更好的机会。还探讨了该化合物的化学和生物学性质评估及其在制药和其他行业的潜在应用。本综述旨在总结从真菌中筛选和纯化短杆菌肽类的技术和工具以及其对各种病原体生物活性的现有数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4992/11611045/b4d2ca5392c1/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4992/11611045/2b33abaa4bee/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4992/11611045/b4d2ca5392c1/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4992/11611045/2b33abaa4bee/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4992/11611045/b4d2ca5392c1/gr1.jpg

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本文引用的文献

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Comput Struct Biotechnol J. 2023 Feb 24;21:1860-1873. doi: 10.1016/j.csbj.2023.02.046. eCollection 2023.
2
Peptaibol Production and Characterization from and Their Action as Biofungicide.来自[具体来源未给出]的肽菌素的生产、表征及其作为生物杀菌剂的作用。
J Fungi (Basel). 2022 Sep 29;8(10):1037. doi: 10.3390/jof8101037.
3
Chemometrics and genome mining reveal an unprecedented family of sugar acid-containing fungal nonribosomal cyclodepsipeptides.
化学计量学和基因组挖掘揭示了一类前所未有的含糖酸的真菌非核糖体环二肽。
Proc Natl Acad Sci U S A. 2022 Aug 9;119(32):e2123379119. doi: 10.1073/pnas.2123379119. Epub 2022 Aug 1.
4
14-Residue peptaibol velutibol A from : its structural and cytotoxic evaluation.来自[具体来源]的14个氨基酸残基的肽菌素类抗生素velutibol A:其结构与细胞毒性评估
RSC Adv. 2020 Aug 24;10(52):31233-31242. doi: 10.1039/d0ra05780k. eCollection 2020 Aug 21.
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Longibrachiamide A, a 20-Residue Peptaibol Isolated from Trichoderma longibrachiatum Rifai DMG-3-1-1.长镰菌素 A,一种从长枝木霉 Rifai DMG-3-1-1 中分离得到的 20 残基肽类抗生素。
Chem Biodivers. 2022 Jun;19(6):e202200286. doi: 10.1002/cbdv.202200286. Epub 2022 May 17.
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