Jonani Bwambale, Kasule Emmanuel Charles, Bwire Herman Roman, Mboowa Gerald
Department of Immunology and Molecular Biology, School of Biomedical Sciences, College of Health Sciences, Makerere University, P.O. Box 7072, Kampala, Uganda.
Laboratory Department, Sebbi Hospital, P.O. Box 101601, Wakiso, Uganda.
Diagn Progn Res. 2024 Dec 5;8(1):16. doi: 10.1186/s41512-024-00180-6.
This systematic review and meta-analysis evaluated reported prevalence and diagnostic methods for identifying Candida africana, an opportunistic yeast associated with vaginal and oral candidiasis. A comprehensive literature search yielded 53 studies meeting the inclusion criteria, 2 of which were case studies. The pooled prevalence of C. africana among 20,571 participants was 0.9% (95% CI: 0.7-1.3%), with significant heterogeneity observed (I = 79%, p < 0.01). Subgroup analyses revealed regional variations, with North America showing the highest prevalence (4.6%, 95% CI: 1.8-11.2%). The majority 84.52% of the C. africana have been isolated from vaginal samples, 8.37% from oral samples, 3.77% from urine, 2.09% from glans penis swabs, and 0.42% from rectal swabs, nasal swabs, and respiratory tract expectorations respectively. No C. africana has been isolated from nail samples. Hyphal wall protein 1 gene PCR was the most used diagnostic method for identifying C. africana. It has been used to identify 70% of the isolates. A comparison of methods revealed that the Vitek-2 system consistently failed to differentiate C. africana from Candida albicans, whereas MALDI-TOF misidentified several isolates compared with HWP1 PCR. Factors beyond diagnostic methodology may influence C. africana detection rates. We highlight the importance of adapting molecular methods for resource-limited settings or developing equally accurate but more accessible alternatives for the identification and differentiation of highly similar and cryptic Candida species such as C. africana.
本系统评价和荟萃分析评估了已报道的非洲假丝酵母菌的患病率及诊断方法,该菌是一种与阴道和口腔念珠菌病相关的机会性酵母菌。全面的文献检索产生了53项符合纳入标准的研究,其中2项为病例研究。在20,571名参与者中,非洲假丝酵母菌的合并患病率为0.9%(95%CI:0.7 - 1.3%),观察到显著的异质性(I = 79%,p < 0.01)。亚组分析显示存在地区差异,北美患病率最高(4.6%,95%CI:1.8 - 11.2%)。大多数(84.52%)非洲假丝酵母菌分离自阴道样本,8.37%分离自口腔样本,3.77%分离自尿液,2.09%分离自阴茎头拭子,分别有0.42%分离自直肠拭子、鼻拭子和呼吸道痰液。未从指甲样本中分离出非洲假丝酵母菌。菌丝壁蛋白1基因PCR是鉴定非洲假丝酵母菌最常用的诊断方法,已用于鉴定70%的分离株。方法比较显示,Vitek - 2系统始终无法将非洲假丝酵母菌与白色念珠菌区分开来,而基质辅助激光解吸电离飞行时间质谱(MALDI - TOF)与HWP1 PCR相比错误鉴定了几个分离株。诊断方法之外的因素可能会影响非洲假丝酵母菌的检测率。我们强调了针对资源有限环境调整分子方法或开发同样准确但更易获得的替代方法以鉴定和区分高度相似且隐匿的念珠菌物种(如非洲假丝酵母菌)的重要性。