Angulo Jesús, Ardá Ana, Bertuzzi Sara, Canales Angeles, Ereño-Orbea June, Gimeno Ana, Gomez-Redondo Marcos, Muñoz-García Juan C, Oquist Paola, Monaco Serena, Poveda Ana, Unione Luca, Jiménez-Barbero Jesús
Institute for Chemical Research (IIQ), CSIC-University of Seville, 49 Américo Vespucio, 41092 Seville, Spain.
Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), 48160 Derio, Bizkaia, Spain; Ikerbasque, Basque Foundation for Science, Plaza Euskadi 5, 48009 Bilbao, Spain.
Prog Nucl Magn Reson Spectrosc. 2024 Nov-Dec;144-145:97-152. doi: 10.1016/j.pnmrs.2024.10.002. Epub 2024 Oct 12.
Glycans are ubiquitous in nature, decorating our cells and serving as the initial points of contact with any visiting entities. These glycan interactions are fundamental to host-pathogen recognition and are related to various diseases, including inflammation and cancer. Therefore, understanding the conformations and dynamics of glycans, as well as the key features that regulate their interactions with proteins, is crucial for designing new therapeutics. Due to the intrinsic flexibility of glycans, NMR is an essential tool for unravelling these properties. In this review, we describe the key NMR parameters that can be extracted from the different experiments, and which allow us to deduce the necessary geometry and molecular motion information, with a special emphasis on assessing the internal motions of the glycosidic linkages. We specifically address the NMR peculiarities of various natural glycans, from histo-blood group antigens to glycosaminoglycans, and also consider the special characteristics of their synthetic analogues (glycomimetics). Finally, we discuss the application of NMR protocols to study glycan-related molecular recognition events, both from the carbohydrate and receptor perspectives, including the use of stable isotopes and paramagnetic NMR methods to overcome the inherent degeneracy of glycan chemical shifts.
聚糖在自然界中无处不在,修饰着我们的细胞,并作为与任何外来物质接触的起始点。这些聚糖相互作用是宿主 - 病原体识别的基础,并且与包括炎症和癌症在内的各种疾病相关。因此,了解聚糖的构象和动力学,以及调节它们与蛋白质相互作用的关键特征,对于设计新的治疗方法至关重要。由于聚糖具有固有的灵活性,核磁共振(NMR)是揭示这些特性的重要工具。在这篇综述中,我们描述了可以从不同实验中提取的关键NMR参数,这些参数使我们能够推断出必要的几何结构和分子运动信息,特别强调评估糖苷键的内部运动。我们具体讨论了从组织血型抗原到糖胺聚糖等各种天然聚糖的NMR特性,还考虑了它们的合成类似物(糖模拟物)的特殊特征。最后,我们从碳水化合物和受体的角度讨论了NMR方法在研究聚糖相关分子识别事件中的应用,包括使用稳定同位素和顺磁NMR方法来克服聚糖化学位移固有的简并性。