Cano Patricio, Seltzer Tischan, Seltzer Jedediah, Peng Alice, Landis Justin, Pluta Linda, Dittmer Dirk P
Lineberger Comprehensive Cancer Center and Department of Microbiology and Immunology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
J Med Virol. 2024 Dec;96(12):e70105. doi: 10.1002/jmv.70105.
"When you can measure what you are speaking about, and express it in numbers, you know something about it." is a famous quote attributed to Lord Kelvin. This sentiment puts viral load measurements at the center of virology. Viral load, or more precisely, DNA copy number measurements, are also used to follow infections with human herpesviruses, such as Kaposi sarcoma herpesvirus (KSHV) and Epstein-Barr Virus (EBV). EBV and KSHV are associated with human cancers, and determining their DNA copy numbers in the context of cancer prediction and progression on therapy is of fundamental scientific and translational interest. Yet, there is no generally accepted assay for KSHV DNA quantitation, and KSHV viral load is not used in clinical decision-making. Here, we review the history of KSHV DNA detection assays, explore factors that affect sensitivity and specificity, and describe an automated, high-throughput, real-time quantitative polymerase chain reaction (PCR) assay for KSHV and EBV. In conjunction with a digital PCR assay using the same primer/probe combination, we describe how to determine the absolute KSHV genome copy numbers in plasma, peripheral blood mononuclear cells, saliva, and other easily accessible body fluids.
“当你能够测量你所谈论的事物,并能用数字表达它时,你就算对它有所了解了。”这是一句 attributed to Lord Kelvin 的名言。这种观点将病毒载量测量置于病毒学的核心位置。病毒载量,或者更确切地说,DNA 拷贝数测量,也被用于追踪人类疱疹病毒的感染情况,比如卡波西肉瘤疱疹病毒(KSHV)和爱泼斯坦 - 巴尔病毒(EBV)。EBV 和 KSHV 与人类癌症相关,在癌症预测和治疗进展的背景下确定它们的 DNA 拷贝数具有重要的科学和转化意义。然而,目前尚无被普遍接受的 KSHV DNA 定量检测方法
,并且 KSHV 病毒载量未被用于临床决策。在此,我们回顾 KSHV DNA 检测方法的历史,探讨影响灵敏度和特异性的因素,并描述一种用于 KSHV 和 EBV 的自动化、高通量、实时定量聚合酶链反应(PCR)检测方法。结合使用相同引物/探针组合的数字 PCR 检测方法,我们描述了如何确定血浆、外周血单核细胞、唾液和其他易于获取的体液中的绝对 KSHV 基因组拷贝数。