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基于叶绿素荧光的水稻干旱胁迫水平感知与分类

Sensing and classification of rice ( L.) drought stress levels based on chlorophyll fluorescence.

作者信息

Xia Q, Fu L J, Tang H, Song L, Tan J L, Guo Y

机构信息

Key Laboratory of Advanced Process Control for Light Industry, Ministry of Education, School of IoT, Jiangnan University, 214122 Wuxi, China.

Joint International Research Laboratory of Agriculture and Agri-Product Safety, Yangzhou University, 225009 Yangzhou, China.

出版信息

Photosynthetica. 2022 Feb 28;60(1):102-109. doi: 10.32615/ps.2022.005. eCollection 2022.

DOI:10.32615/ps.2022.005
PMID:39649002
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11559473/
Abstract

Sensing and classification of drought stress levels are very important to agricultural production. In this work, rice drought stress levels were classified based on the commonly used chlorophyll fluorescence (ChlF) parameter (F/F), feature data (induction features), and the whole OJIP induction (induction curve) by using a Support Vector Machine (SVM). The classification accuracies were compared with those obtained by the K-Nearest Neighbors (KNN) and the Ensemble model (Ensemble) correspondingly. The results show that the SVM can be used to classify drought stress levels of rice more accurately compared to the KNN and the Ensemble and the classification accuracy (86.7%) for the induction curve as input is higher than the accuracy (43.9%) with F/F as input and the accuracy (72.7%) with induction features as input. The results imply that the induction curve carries important information on plant physiology. This work provides a method of determining rice drought stress levels based on ChlF.

摘要

干旱胁迫水平的感知和分类对农业生产非常重要。在这项工作中,利用支持向量机(SVM),基于常用的叶绿素荧光(ChlF)参数(F/F)、特征数据(诱导特征)以及整个OJIP诱导过程(诱导曲线)对水稻干旱胁迫水平进行分类。相应地,将分类准确率与通过K近邻算法(KNN)和集成模型(Ensemble)获得的准确率进行比较。结果表明,与KNN和Ensemble相比,SVM能够更准确地对水稻干旱胁迫水平进行分类,以诱导曲线作为输入的分类准确率(86.7%)高于以F/F作为输入的准确率(43.9%)以及以诱导特征作为输入的准确率(72.7%)。结果表明,诱导曲线携带了关于植物生理的重要信息。这项工作提供了一种基于叶绿素荧光确定水稻干旱胁迫水平的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dbb/11559473/347d499a07dd/PS-60-1-60102-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dbb/11559473/f0730a9e9c56/PS-60-1-60102-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dbb/11559473/67b784514dab/PS-60-1-60102-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dbb/11559473/347d499a07dd/PS-60-1-60102-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dbb/11559473/f0730a9e9c56/PS-60-1-60102-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dbb/11559473/67b784514dab/PS-60-1-60102-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dbb/11559473/347d499a07dd/PS-60-1-60102-g003.jpg

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Plant Cell Environ. 2021 Sep;44(9):2858-2878. doi: 10.1111/pce.14136. Epub 2021 Jul 10.
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Linking changes in chlorophyll a fluorescence with drought stress susceptibility in mung bean [Vigna radiata (L.) Wilczek].将叶绿素荧光变化与绿豆(Vigna radiata (L.) Wilczek)抗旱性的敏感性联系起来。
Physiol Plant. 2021 Jun;172(2):1244-1254. doi: 10.1111/ppl.13327. Epub 2021 Jan 18.
3
The polyphasic chlorophyll a fluorescence rise measured under high intensity of exciting light.
在高强度激发光下测量的多相叶绿素a荧光上升。
Funct Plant Biol. 2006 Feb;33(1):9-30. doi: 10.1071/FP05095.
4
Modelling and simulation of chlorophyll fluorescence from PSII of a plant leaf as affected by both illumination light intensities and temperatures.受光照强度和温度影响的植物叶片光系统II叶绿素荧光的建模与模拟。
IET Syst Biol. 2019 Dec;13(6):327-332. doi: 10.1049/iet-syb.2019.0039.
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Modelling and simulation of photosynthetic activities in C plants as affected by CO.C 植物光合活性对 CO 的影响的建模与模拟。
IET Syst Biol. 2019 Jun;13(3):101-108. doi: 10.1049/iet-syb.2018.5064.
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Biomarkers for grain yield stability in rice under drought stress.干旱胁迫下水稻粒产量稳定性的生物标志物。
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