Markel Kasey, Waldburger Lucas, Shih Patrick M
Department of Plant and Microbial Biology University of California Berkeley California USA.
Feedstocks Division Joint BioEnergy Institute Emeryville California USA.
Plant Direct. 2024 Aug 21;8(8):e70000. doi: 10.1002/pld3.70000. eCollection 2024 Aug.
RNA methylation plays a central regulatory role in plant biology and is a relatively new target for plant improvement efforts. In nearly all cases, perturbation of the RNA methylation machinery results in deleterious phenotypes. However, a recent landmark paper reported that transcriptome-wide use of the human RNA demethylase FTO substantially increased the yield of rice and potatoes. Here, we have performed the first independent replication of those results and demonstrated broader transferability of the trait, finding increased flower and fruit count in the model species . We also performed RNA-seq of our FTO-transgenic plants, which we analyzed in conjunction with previously published datasets to detect several previously unrecognized patterns in the functional and structural classification of the upregulated and downregulated genes. From these, we present mechanistic hypotheses to explain these surprising results with the goal of spurring more widespread interest in this promising new approach to plant engineering.
RNA甲基化在植物生物学中起着核心调控作用,并且是植物改良研究中一个相对较新的靶点。几乎在所有情况下,RNA甲基化机制的扰动都会导致有害表型。然而,最近一篇具有里程碑意义的论文报道,在全转录组范围内使用人类RNA去甲基化酶FTO可大幅提高水稻和土豆的产量。在此,我们首次对这些结果进行了独立验证,并证明了该性状具有更广泛的可转移性,发现在模式植物中花和果实数量增加。我们还对FTO转基因植物进行了RNA测序,并结合先前发表的数据集进行分析,以检测上调和下调基因在功能和结构分类中几种先前未被识别的模式。基于这些,我们提出了机制假说,以解释这些惊人的结果,目的是激发人们对这种有前景的植物工程新方法产生更广泛的兴趣。