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番茄红素环化酶基因家族的综合分析及其对盐胁迫的响应

A Comprehensive Analysis of the 9-Cis Epoxy Carotenoid Dioxygenase Gene Family and Their Responses to Salt Stress in L.

作者信息

Omari Alzahrani Fatima

机构信息

Department of Biology, Faculty of Sciences, Al-Baha University, Al-Baha 65729, Saudi Arabia.

出版信息

Plants (Basel). 2024 Nov 27;13(23):3327. doi: 10.3390/plants13233327.

DOI:10.3390/plants13233327
PMID:39683120
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11644444/
Abstract

Barley ( L.) is among the earliest crops to be cultivated and is also considered a crucial staple crop. Nevertheless, the negative effects of abiotic stress on both the quality and productivity of barley are significant. Nine-cis-epoxycarotenoid dioxygenases (NCEDs) are rate-limiting enzymes in plants that cleave carotenoids and produce abscisic acid (ABA). The poor utilization of barley s in stress-resistant genetic breeding is due to the lack of appropriate information about their potential function in abiotic stress. The current study revealed five genes in the barley genome (-), which are distributed unevenly on barley chromosomes. The PF03055 domain is present in all s, and they encode 413~643 amino acids. Phylogenetic analysis showed that genes were categorized into three distinct clades, confirming the homology of genes between L., L., and L. Expression analysis revealed that 1 is significantly upregulated under high salt stress, indicating its potential role in enhancing salt tolerance. In contrast, 3 and 4 exhibited downregulation, suggesting a complex regulatory mechanism in response to varying salt stress levels. These findings will enhance our comprehension of the genetic composition and evolutionary development of the gene family and provide a basis for future research on their role in response to salt-induced stress.

摘要

大麦(L.)是最早被栽培的作物之一,也被认为是一种重要的主粮作物。然而,非生物胁迫对大麦的品质和产量都有显著的负面影响。九顺式环氧类胡萝卜素双加氧酶(NCEDs)是植物中裂解类胡萝卜素并产生脱落酸(ABA)的限速酶。大麦在抗逆遗传育种中的利用不足,是由于缺乏关于其在非生物胁迫中潜在功能的适当信息。当前的研究揭示了大麦基因组中的五个基因(-),它们在大麦染色体上分布不均。所有基因中都存在PF03055结构域,并且它们编码413至643个氨基酸。系统发育分析表明,这些基因被分为三个不同的进化枝,证实了大麦(L.)、小麦(L.)和黑麦(L.)之间这些基因的同源性。表达分析显示,1在高盐胁迫下显著上调,表明其在增强耐盐性方面的潜在作用。相反,3和4表现出下调,表明在响应不同盐胁迫水平时存在复杂的调控机制。这些发现将增进我们对NCED基因家族遗传组成和进化发展的理解,并为未来研究它们在响应盐诱导胁迫中的作用提供基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/1fa02890b715/plants-13-03327-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/16e5485b32bc/plants-13-03327-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/11a732c1afb8/plants-13-03327-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/631cd6fd5692/plants-13-03327-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/e1a50e673203/plants-13-03327-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/d94825632e0e/plants-13-03327-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/764f41d805f2/plants-13-03327-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/ba726c79b098/plants-13-03327-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/e2a5b75ab3b3/plants-13-03327-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/1fa02890b715/plants-13-03327-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/16e5485b32bc/plants-13-03327-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/11a732c1afb8/plants-13-03327-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/631cd6fd5692/plants-13-03327-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/e1a50e673203/plants-13-03327-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/d94825632e0e/plants-13-03327-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/764f41d805f2/plants-13-03327-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/ba726c79b098/plants-13-03327-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/e2a5b75ab3b3/plants-13-03327-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c875/11644444/1fa02890b715/plants-13-03327-g009.jpg

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