Hasan M Rezaul, Kump Andrew J, Stepaniak Evelyn C, Panta Manoj, Shashidhar Kuncha, Katariya Rajnandani, Sabbir Mofazzal K, Schwab Kristopher R, Inlow Mark H, Chen Ye, Ahmad Shaad M
Department of Biology, Indiana State University, Terre Haute, IN 47809, USA.
The Center for Genomic Advocacy, Indiana State University, Terre Haute, IN 47809, USA.
Int J Mol Sci. 2024 Dec 1;25(23):12933. doi: 10.3390/ijms252312933.
Forkhead box (Fox) transcription factors (TFs) mediate multiple conserved cardiogenic processes in both mammals and . Our prior work identified the roles of two Fox genes, () and (), in cardiac progenitor cell specification and division, and in the proper positioning of cardiac cell subtypes. Fox TF binding sites are also significantly enriched in the enhancers of genes expressed in the heart, suggesting that these genes may play a core regulatory role in one or more of these cardiogenic processes. We identified downstream targets of Jumu by comparing transcriptional expression profiles of flow cytometry-sorted mesodermal cells from wild-type embryos and embryos completely lacking the gene and found that genes with functional annotation and ontological features suggesting roles in cell division were overrepresented among Jumu targets. Phenotypic analysis of a subset of these targets identified 21 -regulated genes that mediate cardiac progenitor cell division, one of which, (), was characterized in more detail. Finally, the observation that many of these 21 genes and/or their orthologs exhibit genetic or physical interactions among themselves indicates that Jumu is a master regulator acting as a hub of a cardiac progenitor cell division-mediating network.
叉头框(Fox)转录因子(TFs)在哺乳动物和……中介导多种保守的心脏发生过程。我们之前的工作确定了两个Fox基因,即()和(),在心脏祖细胞的特化和分裂以及心脏细胞亚型的正确定位中的作用。Fox TF结合位点在心脏中表达的基因的增强子中也显著富集,这表明这些基因可能在这些心脏发生过程中的一个或多个过程中发挥核心调节作用。我们通过比较野生型胚胎和完全缺失该基因的胚胎中通过流式细胞术分选的中胚层细胞的转录表达谱,确定了Jumu的下游靶标,并发现具有功能注释和本体特征表明在细胞分裂中起作用的基因在Jumu靶标中占比过高。对这些靶标的一个子集进行的表型分析确定了21个介导心脏祖细胞分裂的Jumu调控基因,其中一个基因,即(),进行了更详细的表征。最后,观察到这21个基因中的许多基因和/或它们的直系同源基因之间存在遗传或物理相互作用,这表明Jumu是一个主调节因子,作为心脏祖细胞分裂介导网络的枢纽发挥作用。