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白梨基因家族鉴定及番茄中SlIRT1在缺铁响应中的功能分析

Gene Family Identification in Chinese White Pear () and the Functional Analysis of in Fe Deficiency Responses in Tomato.

作者信息

Wei Pengfei, Guo Guoling, Shen Taijing, Luo Anran, Wu Qin, Zhou Shanshan, Tang Xiaomei, Liu Lun, Ye Zhenfeng, Zhu Liwu, Jia Bing

机构信息

School of Horticulture, Anhui Agricultural University, Hefei 230036, China.

Jinzhai Modern Agricultural Cooperation Center, Integrated Experimental Station in Dabie Mountains, Anhui Agricultural University, Lu'an 237000, China.

出版信息

Int J Mol Sci. 2024 Dec 3;25(23):12980. doi: 10.3390/ijms252312980.

Abstract

Iron (Fe) deficiency poses a major threat to pear ( spp.) fruit yield and quality. The () plays a vital part in plant stress responses. However, the gene family is yet to be characterized, and little focus has been given to the function of the gene in Fe deficiency responses. Here, we identified 15 GH3 proteins from the proteome of Chinese white pear () and analyzed their features using bioinformatics approaches. Structure domain and motif analyses showed that these PbrGH3s were relatively conserved, and phylogenetic investigation displayed that they were clustered into two groups (GH3 I and GH3 II). Meanwhile, -acting regulatory element searches of the corresponding promoters revealed that these might be involved in ABA- and drought-mediated responses. Moreover, the analysis of gene expression patterns exhibited that most of the were highly expressed in the calyxes, ovaries, and stems of pear plants, and some genes were significantly differentially expressed in normal and Fe-deficient pear leaves, especially for . Subsequently, the sequence of was isolated from the pear, and the transgenic tomato plants with overexpression (OE) were generated to investigate its role in Fe deficiency responses. It was found that the OE plants were more sensitive to Fe deficiency stress. Compared with wild-type (WT) plants, the rhizosphere acidification and ferric reductase activities were markedly weakened, and the capacity to scavenge reactive oxygen species was prominently impaired in OE plants under Fe starvation conditions. Moreover, the expressions of Fe-acquisition-associated genes, such as , , , and , were all greatly repressed in OE leaves under Fe depravation stress, and the free IAA level was dramatically reduced, while the conjugated IAA contents were notably escalated. Combined, our findings suggest that pear negatively regulates Fe deficiency responses in tomato plants, and might help enrich the molecular basis of Fe deficiency responses in woody plants.

摘要

缺铁对梨(品种)果实的产量和品质构成重大威胁。(此处原文括号内容缺失,无法准确翻译)在植物应激反应中起着至关重要的作用。然而,(此处原文括号内容缺失,无法准确翻译)基因家族尚未得到表征,并且很少关注(此处原文括号内容缺失,无法准确翻译)基因在缺铁反应中的功能。在这里,我们从中国白梨(品种)的蛋白质组中鉴定出15种GH3蛋白,并使用生物信息学方法分析了它们的特征。结构域和基序分析表明,这些PbrGH3s相对保守,系统发育研究显示它们被聚类为两组(GH3 I和GH3 II)。同时,对相应启动子的顺式作用调控元件搜索表明,这些(此处原文括号内容缺失,无法准确翻译)可能参与ABA和干旱介导的反应。此外,基因表达模式分析表明,大多数(此处原文括号内容缺失,无法准确翻译)在梨树的花萼、子房和茎中高表达,一些基因在正常和缺铁梨叶中显著差异表达,尤其是(此处原文括号内容缺失,无法准确翻译)。随后,从梨中分离出(此处原文括号内容缺失,无法准确翻译)的序列,并生成了过表达(OE)(此处原文括号内容缺失,无法准确翻译)的转基因番茄植株,以研究其在缺铁反应中的作用。发现OE植株对缺铁胁迫更敏感。与野生型(WT)植株相比,在缺铁条件下,OE植株的根际酸化和铁还原酶活性明显减弱,清除活性氧的能力显著受损。此外,在缺铁胁迫下,OE叶片中与铁吸收相关的基因,如(此处原文括号内容缺失,无法准确翻译)、(此处原文括号内容缺失,无法准确翻译)、(此处原文括号内容缺失,无法准确翻译)和(此处原文括号内容缺失,无法准确翻译)的表达均受到极大抑制,游离IAA水平显著降低,而结合IAA含量显著升高。综合来看,我们的研究结果表明,梨(此处原文括号内容缺失,无法准确翻译)负调控番茄植株的缺铁反应,可能有助于丰富木本植物缺铁反应的分子基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f66/11641127/a5dd59ea12de/ijms-25-12980-g001.jpg

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