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小于胎龄儿胎盘的蛋白质组学和转录组学综合图谱

Integrated proteomic and transcriptomic landscape of human placenta in small for gestational age infants.

作者信息

Jin Heyue, Wang Xianyan, Li Lingyu, Rui Chen, Gan Hong, Wang Qunan, Tao Fangbiao, Zhu Yumin

机构信息

Department of Maternal & Child and Adolescent Health, School of Public Health, MOE Key Laboratory of Population Health Across Life Cycle, Anhui Provincial Key Laboratory of Population Health and Aristogenics, Anhui Medical University, Hefei, Anhui 230032, China.

Medical School, Nanjing University, Nanjing, Jiangsu 210093, China.

出版信息

iScience. 2024 Nov 19;27(12):111423. doi: 10.1016/j.isci.2024.111423. eCollection 2024 Dec 20.

Abstract

Small for gestational age (SGA) infants affected by placental insufficiency are exposed to the risk of stillbirth and long-term complications. Based on RNA-seq and mass spectrometry, we identified dysregulated RNAs and proteins from the comparisons of SGA placental tissues and controls. We revealed two SGA-relevant co-expression modules (SRMs) that also significantly distinguished SGA from controls. Then we performed an integrated analysis of transcriptomic and proteomic profiles to trace their links to SGA as well as their significant correlations. For the core functional molecules we screened, we revealed their potential upstream regulators and validated them experimentally in an independent cohort. Overall, we pointed out insights into different molecular pathways for the pathological mechanisms of SGA and indicated potential target molecules that may be drivers of placental aberrations in the SGA infants.

摘要

受胎盘功能不全影响的小于胎龄(SGA)婴儿面临死产和长期并发症的风险。基于RNA测序和质谱分析,我们通过比较SGA胎盘组织和对照,鉴定出了失调的RNA和蛋白质。我们揭示了两个与SGA相关的共表达模块(SRM),它们也能显著区分SGA和对照。然后,我们对转录组和蛋白质组谱进行了综合分析,以追踪它们与SGA的联系以及它们之间的显著相关性。对于我们筛选出的核心功能分子,我们揭示了它们潜在的上游调节因子,并在一个独立队列中进行了实验验证。总体而言,我们指出了对SGA病理机制不同分子途径的见解,并指出了可能是SGA婴儿胎盘异常驱动因素的潜在靶分子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/adfd/11648249/d04695304535/fx1.jpg

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