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PSAP复合物中的RNPS1在细胞周期中控制周期性前体mRNA剪接。

RNPS1 in PSAP complex controls periodic pre-mRNA splicing over the cell cycle.

作者信息

Fukumura Kazuhiro, Masuda Akio, Takeda Jun-Ichi, Nagano Osamu, Saya Hideyuki, Ohno Kinji, Mayeda Akila

机构信息

Division of Gene Regulation, Oncology Innovation Center, Fujita Health University, Toyoake, Aichi 470-1192, Japan.

Division of Neurogenetics, Center for Neurological Disease and Cancer, Nagoya University Graduate School of Medicine, Nagoya, Aichi 466-8550, Japan.

出版信息

iScience. 2024 Nov 15;27(12):111400. doi: 10.1016/j.isci.2024.111400. eCollection 2024 Dec 20.

DOI:10.1016/j.isci.2024.111400
PMID:39687031
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11648250/
Abstract

Cell cycle progression requires periodic gene expression through splicing control. However, the splicing factor that directly controls this cell cycle-dependent splicing remains unknown. Cell cycle-dependent expression of the (aurora kinase B) gene is essential for chromosome segregation and cytokinesis. We previously reported that RNPS1 is essential to maintain precise splicing in intron 5. Here we show that RNPS1 plays this role in PSAP complex with PNN and SAP18, but not ASAP complex with ACIN1 and SAP18. Whole-transcriptome sequencing of RNPS1- and PNN-deficient cells indicated that RNPS1, either alone or as PSAP complex, is an essential splicing factor for a subset of introns. Remarkably, protein expression of RNPS1, but not PNN, is coordinated with cyclical splicing in PSAP-controlled introns including intron 5. The ubiquitin-proteasome pathway is involved in the periodic decrease of RNPS1 protein level. RNPS1 is a key factor that controls periodic splicing during the cell cycle.

摘要

细胞周期进程需要通过剪接控制来实现周期性基因表达。然而,直接控制这种细胞周期依赖性剪接的剪接因子仍不清楚。极光激酶B基因的细胞周期依赖性表达对于染色体分离和胞质分裂至关重要。我们之前报道过,RNPS1对于维持极光激酶B基因第5内含子的精确剪接至关重要。在此我们表明,RNPS1在与PNN和SAP18组成的PSAP复合物中发挥这一作用,而不是在与ACIN1和SAP18组成的ASAP复合物中。对缺乏RNPS1和PNN的细胞进行的全转录组测序表明,RNPS1单独或作为PSAP复合物,是一部分内含子的必需剪接因子。值得注意的是,RNPS1而非PNN的蛋白表达与包括极光激酶B基因第5内含子在内的PSAP控制的内含子中的周期性剪接相协调。泛素-蛋白酶体途径参与了RNPS1蛋白水平的周期性降低。RNPS1是控制细胞周期中周期性剪接的关键因子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/56d4b0c3dec6/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/d2c3e7152373/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/9e57ee644475/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/b015f2c5fb09/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/17eb07557f3d/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/d0a2338fceb8/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/1e8e3fff335d/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/56d4b0c3dec6/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/d2c3e7152373/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/9e57ee644475/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/b015f2c5fb09/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/17eb07557f3d/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/d0a2338fceb8/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/1e8e3fff335d/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43c9/11648250/56d4b0c3dec6/gr6.jpg

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本文引用的文献

1
SPF45/RBM17-dependent, but not U2AF-dependent, splicing in a distinct subset of human short introns.在人类的一小部分短内含子中,存在着依赖 SPF45/RBM17,但不依赖 U2AF 的剪接。
Nat Commun. 2021 Aug 13;12(1):4910. doi: 10.1038/s41467-021-24879-y.
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The Exon Junction Complex Core Represses Cancer-Specific Mature mRNA Re-splicing: A Potential Key Role in Terminating Splicing.外显子连接复合物核心抑制癌症特异性成熟 mRNA 的再剪接:在终止剪接中的潜在关键作用。
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参与剪接调控和髓系肿瘤的人 LUC7 样蛋白的功能分析。
Cell Rep. 2021 Apr 13;35(2):108989. doi: 10.1016/j.celrep.2021.108989.
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A Day in the Life of the Exon Junction Complex.外显子连接复合物的一天
Biomolecules. 2020 Jun 5;10(6):866. doi: 10.3390/biom10060866.
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Structural Insights into Nuclear pre-mRNA Splicing in Higher Eukaryotes.高等真核生物核前体 mRNA 剪接的结构见解。
Cold Spring Harb Perspect Biol. 2019 Nov 1;11(11):a032417. doi: 10.1101/cshperspect.a032417.
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Exon Junction Complex Shapes the Transcriptome by Repressing Recursive Splicing.外显子连接复合物通过抑制递归剪接来塑造转录组。
Mol Cell. 2018 Nov 1;72(3):496-509.e9. doi: 10.1016/j.molcel.2018.09.033.
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Exon Junction Complexes Suppress Spurious Splice Sites to Safeguard Transcriptome Integrity.外显子连接复合物抑制虚假剪接位点以保障转录组完整性。
Mol Cell. 2018 Nov 1;72(3):482-495.e7. doi: 10.1016/j.molcel.2018.08.030.
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Exon Junction Complexes can have distinct functional flavours to regulate specific splicing events.外显子连接复合物可以具有不同的功能风味,以调节特定的剪接事件。
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Splicing activator RNPS1 suppresses errors in pre-mRNA splicing: A key factor for mRNA quality control.剪接激活因子RNPS1抑制前体mRNA剪接错误:mRNA质量控制的关键因素。
Biochem Biophys Res Commun. 2018 Feb 12;496(3):921-926. doi: 10.1016/j.bbrc.2018.01.120. Epub 2018 Jan 31.
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Dynamic ubiquitin signaling in cell cycle regulation.细胞周期调控中的动态泛素信号传导
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