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基因型而非体型决定大西洋鲑鱼洄游至河流的成功率。

Genotype But Not Body Shape Predicts River Migration Success in Atlantic Salmon.

作者信息

Moccetti Paolo, Bolland Jonathan D, Adams Colin E, Rodger Jessica R, Honkanen Hannele M, Newton Matthew, Lothian Angus J, Nunn Andy D, Joyce Domino A

机构信息

Energy and Environment Institute University of Hull Hull UK.

Evolutionary and Ecological Genomics Group, School of Natural Sciences University of Hull Hull UK.

出版信息

Ecol Evol. 2024 Dec 16;14(12):e70682. doi: 10.1002/ece3.70682. eCollection 2024 Dec.

DOI:10.1002/ece3.70682
PMID:39687579
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11647181/
Abstract

Migratory species typically undertake demanding long-distance journeys, across different habitat types during which they are exposed to multiple natural and anthropogenic stressors. Mortality during migration is typically high and may be human induced. Understanding individual responses to these selection pressures is rarely attempted because of the challenges of relating individual phenotypic and genetic data to migration success. Here, we show distinct single nucleotide polymorphism (SNP) sets significantly differentiated between Atlantic salmon smolts making successful migrations to sea and those that failed to migrate, in two different rivers. In contrast, morphological variation was not diagnostic of migration success. Populations from each river were genetically distinct, and while different genes were possibly implicated in migration success in each river, they related to common biological processes (e.g., osmoregulation and immune and stress response). Given that migration failure should quickly purge polymorphism at selected SNPs from a population, the question of how genetic diversity in these populations is maintained is an important one. Standing genetic variation could be maintained by different life history strategies and/or environmentally driven balancing selection. Our work highlights the importance of preserving genetic diversity to ensure evolutionary resilience at the population level and has practical implications for management.

摘要

洄游物种通常要进行艰苦的长途迁徙,跨越不同的栖息地类型,在此期间它们会面临多种自然和人为压力源。迁徙过程中的死亡率通常很高,而且可能是人为导致的。由于将个体表型和遗传数据与迁徙成功联系起来存在挑战,因此很少有人尝试了解个体对这些选择压力的反应。在这里,我们展示了在两条不同河流中,成功洄游到大海的大西洋鲑幼鱼和未能洄游的幼鱼之间存在显著差异的单核苷酸多态性(SNP)集。相比之下,形态变异并不能诊断迁徙是否成功。每条河流的种群在基因上是不同的,虽然每条河流中可能有不同的基因与迁徙成功有关,但它们都与共同的生物学过程(如渗透调节、免疫和应激反应)相关。鉴于迁徙失败应该会迅速清除种群中选定SNP处的多态性,这些种群中遗传多样性如何得以维持是一个重要问题。持久的遗传变异可以通过不同的生活史策略和/或环境驱动的平衡选择来维持。我们的研究强调了保护遗传多样性以确保种群水平进化恢复力的重要性,并对管理具有实际意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/1da66e47ce39/ECE3-14-e70682-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/240554587929/ECE3-14-e70682-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/2598c9d2331f/ECE3-14-e70682-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/677323e4590e/ECE3-14-e70682-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/f935f0bf4c35/ECE3-14-e70682-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/1da66e47ce39/ECE3-14-e70682-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/240554587929/ECE3-14-e70682-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/2598c9d2331f/ECE3-14-e70682-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/677323e4590e/ECE3-14-e70682-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/f935f0bf4c35/ECE3-14-e70682-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b7b/11647181/1da66e47ce39/ECE3-14-e70682-g003.jpg

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本文引用的文献

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Is shape in the eye of the beholder? Assessing landmarking error in geometric morphometric analyses on live fish.形状在旁观者的眼中?在活体鱼类的几何形态分析中评估地标标记误差。
PeerJ. 2023 Aug 17;11:e15545. doi: 10.7717/peerj.15545. eCollection 2023.
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The genetics of bird migration.鸟类迁徙的遗传学。
Curr Biol. 2022 Oct 24;32(20):R1144-R1149. doi: 10.1016/j.cub.2022.07.008.
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Understanding risks and consequences of pathogen infections on the physiological performance of outmigrating Chinook salmon.了解病原体感染对洄游奇努克鲑鱼生理性能的风险和后果。
Conserv Physiol. 2022 Jan 21;10(1):coab102. doi: 10.1093/conphys/coab102. eCollection 2022.
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Infected juvenile salmon can experience increased predation during freshwater migration.受感染的幼鲑在淡水洄游期间可能会遭受更多的捕食。
R Soc Open Sci. 2021 Mar 24;8(3):201522. doi: 10.1098/rsos.201522.
5
Evaluating the impact of hydropower on downstream migrating anguillid eels: Catchment-wide and fine-scale approaches to identify cost-effective solutions.评估水电对下游洄游鳗鲡的影响:全流域和精细尺度的方法来确定具有成本效益的解决方案。
Sci Total Environ. 2020 Dec 15;748:141111. doi: 10.1016/j.scitotenv.2020.141111. Epub 2020 Jul 25.
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Are we designing fishways for diversity? Potential selection on alternative phenotypes resulting from differential passage in brown trout.我们是为多样性而设计鱼道吗?来自于虹鳟鱼不同通道的潜在选择对替代表型的影响。
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Conservation and Management of Salmon in the Age of Genomics.基因组时代的鲑鱼保护与管理。
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Cortisol predicts migration timing and success in both Atlantic salmon and sea trout kelts.皮质醇可预测大西洋鲑和虹鳟鱼幼鱼的洄游时间和洄游成功。
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