来自人类血液感染的ARDL2菌株的全基因组序列
Complete genome sequence of strain ARDL2 from human blood infection.
作者信息
Victorsen Alec, Ellison Aidan, Kubiak Jeffrey, Ferrieri Patricia, Thyagarajan Bharat, Hilt Evann E
机构信息
Department of Laboratory Medicine and Pathology, University of Minnesota, Minneapolis, Minnesota, USA.
出版信息
Microbiol Resour Announc. 2025 Jan 16;14(1):e0091224. doi: 10.1128/mra.00912-24. Epub 2024 Dec 17.
Abstract
This paper describes the genome assembly of a strain ARDL2 isolated from a human blood infection. The genome assembly comprised one circular chromosome with the length of 2,439,195 bp with a G+C content of 34.81%.
摘要
本文描述了从人类血液感染中分离出的ARDL2菌株的基因组组装情况。该基因组组装包含一条长度为2,439,195碱基对的环状染色体，鸟嘌呤与胞嘧啶（G+C）含量为34.81%。
相似文献
1
Complete genome sequence of strain ARDL2 from human blood infection.
Microbiol Resour Announc. 2025 Jan 16;14(1):e0091224. doi: 10.1128/mra.00912-24. Epub 2024 Dec 17.
2
Capnocytophaga endodontalis sp. nov., Isolated from a Human Refractory Periapical Abscess.
Curr Microbiol. 2018 Apr;75(4):420-425. doi: 10.1007/s00284-017-1397-5. Epub 2017 Nov 27.
3
Complete genome sequence of the first strain isolated from a red fox () in Germany.
Microbiol Resour Announc. 2025 Feb 11;14(2):e0122824. doi: 10.1128/mra.01228-24. Epub 2025 Jan 13.
4
Complete genome sequence of the dog commensal and human pathogen Capnocytophaga canimorsus strain 5.
J Bacteriol. 2011 Oct;193(19):5558-9. doi: 10.1128/JB.05853-11.
5
Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845).
Stand Genomic Sci. 2009 Sep 24;1(2):101-9. doi: 10.4056/sigs.15195.
6
sp. nov., isolated from feline oral cavities.
Int J Syst Evol Microbiol. 2023 Mar;73(3). doi: 10.1099/ijsem.0.005731.
7
A Novel 16S rRNA PCR-Restriction Fragment Length Polymorphism Assay to Accurately Distinguish Zoonotic and .
Microbiol Spectr. 2023 Jun 15;11(3):e0291622. doi: 10.1128/spectrum.02916-22. Epub 2023 May 17.
8
Whole genome sequencing identifies a novel species of the genus Capnocytophaga isolated from dog and cat bite wounds in humans.
Sci Rep. 2016 Mar 7;6:22919. doi: 10.1038/srep22919.
9
Characterization of three strains of Capnocytophaga canis isolated from patients with sepsis.
Microbiol Immunol. 2018 Sep;62(9):567-573. doi: 10.1111/1348-0421.12642.
10
Molecular characterization of Capnocytophaga canimorsus and other canine Capnocytophaga spp. and assessment by PCR of their frequencies in dogs.
J Clin Microbiol. 2009 Oct;47(10):3218-25. doi: 10.1128/JCM.01246-09. Epub 2009 Jul 29.
本文引用的文献
1
BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes.
Mol Biol Evol. 2021 Sep 27;38(10):4647-4654. doi: 10.1093/molbev/msab199.
2
metaFlye: scalable long-read metagenome assembly using repeat graphs.
Nat Methods. 2020 Nov;17(11):1103-1110. doi: 10.1038/s41592-020-00971-x. Epub 2020 Oct 5.
3
Screening for prevalence and abundance of Capnocytophaga spp by analyzing NGS data: A scoping review.
Oral Dis. 2021 Oct;27(7):1621-1630. doi: 10.1111/odi.13573. Epub 2020 Aug 31.
4
sp. nov. isolated from the feline oral cavity.
Int J Syst Evol Microbiol. 2020 May;70(5):3355-3360. doi: 10.1099/ijsem.0.004176.
5
Capnocytophaga canimorsus – an underestimated danger after dog or cat bite – review of literature.
Przegl Epidemiol. 2016;70(2):289-295.
6
Prokka: rapid prokaryotic genome annotation.
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
7
Molecular characterization of Capnocytophaga canimorsus and other canine Capnocytophaga spp. and assessment by PCR of their frequencies in dogs.
J Clin Microbiol. 2009 Oct;47(10):3218-25. doi: 10.1128/JCM.01246-09. Epub 2009 Jul 29.
8
Diversity of Capnocytophaga species in children and description of Capnocytophaga leadbetteri sp. nov. and Capnocytophaga genospecies AHN8471.
Int J Syst Evol Microbiol. 2008 Feb;58(Pt 2):324-36. doi: 10.1099/ijs.0.65373-0.
Zotero 插件