Mavrommatis Konstantinos, Gronow Sabine, Saunders Elizabeth, Land Miriam, Lapidus Alla, Copeland Alex, Glavina Del Rio Tijana, Nolan Matt, Lucas Susan, Chen Feng, Tice Hope, Cheng Jan-Fang, Bruce David, Goodwin Lynne, Pitluck Sam, Pati Amrita, Ivanova Natalia, Chen Amy, Palaniappan Krishna, Chain Patrick, Hauser Loren, Chang Yun-Juan, Jeffries Cynthia D, Brettin Thomas, Detter John C, Han Cliff, Bristow James, Göker Markus, Rohde Manfred, Eisen Jonathan A, Markowitz Victor, Kyrpides Nikos C, Klenk Hans-Peter, Hugenholtz Philip
Stand Genomic Sci. 2009 Sep 24;1(2):101-9. doi: 10.4056/sigs.15195.
Capnocytophaga ochracea (Prévot et al. 1956) Leadbetter et al. 1982 is the type species of the genus Capnocytophaga. It is of interest because of its location in the Flavobacteriaceae, a genomically not yet charted family within the order Flavobacteriales. The species grows as fusiform to rod shaped cells which tend to form clumps and are able to move by gliding. C. ochracea is known as a capnophilic (CO(2)-requiring) organism with the ability to grow under anaerobic as well as aerobic conditions (oxygen concentration larger than 15%), here only in the presence of 5% CO(2). Strain VPI 2845(T), the type strain of the species, is portrayed in this report as a gliding, Gram-negative bacterium, originally isolated from a human oral cavity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the flavobacterial genus Capnocytophaga, and the 2,612,925 bp long single replicon genome with its 2193 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
赭黄二氧化碳嗜纤维菌（普雷沃特等人，1956年）利德贝特等人，1982年是二氧化碳嗜纤维菌属的模式种。它之所以受到关注，是因为它在黄杆菌科中的位置，黄杆菌科是黄杆菌目内一个基因组尚未绘制的科。该物种以梭形到杆状细胞的形式生长，这些细胞倾向于形成团块，并能够通过滑行移动。赭黄二氧化碳嗜纤维菌是一种嗜二氧化碳菌（需要二氧化碳），能够在厌氧和好氧条件下（氧气浓度大于15%）生长，这里仅在5%二氧化碳存在的情况下生长。菌株VPI 2845(T)是该物种的模式菌株，在本报告中被描述为一种滑行的革兰氏阴性细菌，最初从人类口腔中分离出来。在这里，我们描述了这种生物体的特征，以及完整的基因组序列和注释。这是黄杆菌属二氧化碳嗜纤维菌的第一个完整基因组序列，这个2612925 bp长的单复制子基因组及其2193个蛋白质编码基因和59个RNA基因是细菌和古菌基因组百科全书项目的一部分。
