Sinha Bidisha, Biswas Arikta, Kaushik Saurabh, Soni Gautam V
Indian Institute of Science Education and Research Kolkata, Mohanpur, West Bengal, India.
Raman Research Institute, Bangalore, Karnataka, India.
Methods Mol Biol. 2025;2881:3-39. doi: 10.1007/978-1-0716-4280-1_1.
Biological cells sample their surrounding microenvironments using nanoscale force sensors on the cell surfaces. These surface-based force and stress sensors generate physical and chemical responses inside the cell. The inherently well-connected cytoskeleton and its physical contacts with the force elements on the nuclear membrane lead these physicochemical responses to cascade all the way inside the cell nucleus, physically altering the nuclear state. These physical alterations of the cell nucleus, through yet-unknown complex steps, elicit physical and functional responses from the chromatin in the form of altered gene expression profiles. This mechanism of force/stress sensing by the cell and then its nuclear response has been shown to play a vital role in maintaining robust cellular homeostasis, controlling gene expression profiles during developmental phases as well as cell differentiation. In the last few years, there has been appreciable progress toward the identification of the molecular players responsible for force sensing. However, the actual sensing mechanism of cell surface-bound force sensors and more importantly cascading of the signals, both physical (via cytosolic force sensing elements such as microtubule and actin framework) as well as chemical (cascade of biochemical signaling from cell surface to nuclear surface and further to the chromatin), inside the cell is poorly understood. In this chapter, we present a review of the currently known molecular players in cellular as well as nuclear force sensing repertoire and their possible mechanistic aspects. We also introduce various biophysical concepts and review some frequently used techniques that are used to describe the force/stress sensing and response of a cell. We hope that this will help in asking clearer questions and designing pointed experiments for better understanding of the force-dependent design principles of the cell surface, nuclear surface, and gene expression.
生物细胞利用细胞表面的纳米级力传感器对周围微环境进行采样。这些基于表面的力和应力传感器在细胞内部产生物理和化学反应。本质上连接良好的细胞骨架及其与核膜上力元件的物理接触,使得这些物理化学反应在细胞核内一路级联,从而物理性地改变核状态。细胞核的这些物理改变,通过尚不清楚的复杂步骤,引发染色质的物理和功能反应,表现为基因表达谱的改变。细胞的这种力/应力感知及其核反应机制已被证明在维持强大的细胞内稳态、控制发育阶段以及细胞分化过程中的基因表达谱方面起着至关重要的作用。在过去几年中,在识别负责力感知的分子方面取得了显著进展。然而,细胞表面结合的力传感器的实际传感机制,更重要的是细胞内信号的级联,包括物理信号(通过诸如微管和肌动蛋白框架等胞质力传感元件)以及化学信号(从细胞表面到核表面再到染色质的生化信号级联),目前还知之甚少。在本章中,我们综述了目前已知的细胞和核力传感库中的分子参与者及其可能的机制方面。我们还介绍了各种生物物理概念,并回顾了一些常用于描述细胞力/应力感知和反应的技术。我们希望这将有助于提出更清晰的问题并设计有针对性的实验,以更好地理解细胞表面、核表面和基因表达的力依赖设计原则。