• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

相似文献

1
Genome sequence of strain TUMSAT-2019, isolated from kuruma shrimp, .从日本对虾中分离出的TUMSAT-2019菌株的基因组序列。
Microbiol Resour Announc. 2025 Feb 11;14(2):e0074624. doi: 10.1128/mra.00746-24. Epub 2024 Dec 20.
2
Genome Sequence of Vibrio nigripulchritudo Strain TUMSAT-TG-2018, Isolated from Diseased Pacific White Shrimp, .从患病的太平洋白对虾中分离出的黑美弧菌菌株TUMSAT-TG-2018的基因组序列
Microbiol Resour Announc. 2020 Dec 3;9(49):e01206-20. doi: 10.1128/MRA.01206-20.
3
Draft Genome Sequence of a Strain Associated with Vibriosis in Pacific White Shrimp ().与太平洋白虾弧菌病相关菌株的基因组序列草图（）
Genome Announc. 2017 Feb 16;5(7):e01662-16. doi: 10.1128/genomeA.01662-16.
4
Comparative genome analyses of five strains provide insights into their virulence-related factors.比较五株菌的基因组分析，有助于了解它们与毒力相关的因素。
Microb Genom. 2022 Feb;8(2). doi: 10.1099/mgen.0.000766.
5
Genome Characterization and Infectivity Potential of Vibriophage-ϕLV6 with Lytic Activity against Luminescent Vibrios of Shrimp Aquaculture.对虾养殖发光弧菌具有裂解活性的噬菌体-ϕLV6 的基因组特征和感染潜力。
Viruses. 2023 Mar 28;15(4):868. doi: 10.3390/v15040868.
6
Vibrio harveyi virulence gene expression in vitro and in vivo during infection in black tiger shrimp Penaeus monodon.哈维氏弧菌在感染斑节对虾期间的体外和体内毒力基因表达
Dis Aquat Organ. 2020 May 14;139:153-160. doi: 10.3354/dao03475.
7
Isolation of Vibrio harveyi from diseased kuruma prawns Penaeus japonicus.
Curr Microbiol. 1996 Aug;33(2):129-32. doi: 10.1007/s002849900087.
8
Virulence properties and pathogenicity of multidrug-resistant Vibrio harveyi associated with luminescent vibriosis in Pacific white shrimp, Penaeus vannamei.与凡纳滨对虾发光病相关的多重耐药哈维弧菌的毒力特性和致病性。
J Invertebr Pathol. 2021 Nov;186:107594. doi: 10.1016/j.jip.2021.107594. Epub 2021 Apr 18.
9
Efficacy of potential phage cocktails against Vibrio harveyi and closely related Vibrio species isolated from shrimp aquaculture environment in the south east coast of India.潜在噬菌体鸡尾酒制剂对从印度东南沿海对虾养殖环境中分离出的哈维氏弧菌及密切相关弧菌的功效。
Vet Microbiol. 2017 Aug;207:83-96. doi: 10.1016/j.vetmic.2017.06.006. Epub 2017 Jun 9.
10
Draft Genome Sequence of Vibrio penaeicida Strain TUMSAT-NU1, Isolated from Diseased Shrimp in Japan.从日本患病虾中分离出的对虾弧菌TUMSAT-NU1菌株的基因组序列草图
Genome Announc. 2018 Mar 15;6(11):e00153-18. doi: 10.1128/genomeA.00153-18.

本文引用的文献

1
Hybracter: enabling scalable, automated, complete and accurate bacterial genome assemblies.Hybracter：实现可扩展、自动化、完整和准确的细菌基因组组装。
Microb Genom. 2024 May;10(5). doi: 10.1099/mgen.0.001244.
2
Porechop_ABI: discovering unknown adapters in Oxford Nanopore Technology sequencing reads for downstream trimming.Porechop_ABI：在牛津纳米孔技术测序读数中发现未知接头以便进行下游修剪。
Bioinform Adv. 2022 Nov 21;3(1):vbac085. doi: 10.1093/bioadv/vbac085. eCollection 2023.
3
Polypolish: Short-read polishing of long-read bacterial genome assemblies.多聚波兰：长读细菌基因组组装的短读抛光。
PLoS Comput Biol. 2022 Jan 24;18(1):e1009802. doi: 10.1371/journal.pcbi.1009802. eCollection 2022 Jan.
4
The genome polishing tool POLCA makes fast and accurate corrections in genome assemblies.基因组精修工具 POLCA 可快速准确地对基因组组装进行修正。
PLoS Comput Biol. 2020 Jun 26;16(6):e1007981. doi: 10.1371/journal.pcbi.1007981. eCollection 2020 Jun.
5
: a serious pathogen of fish and invertebrates in mariculture.：海水养殖中鱼类和无脊椎动物的一种严重病原体。
Mar Life Sci Technol. 2020;2(3):231-245. doi: 10.1007/s42995-020-00037-z. Epub 2020 Apr 3.
6
Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data.Ktrim：一款超快、超准的测序数据接头和质量修剪工具。
Bioinformatics. 2020 Jun 1;36(11):3561-3562. doi: 10.1093/bioinformatics/btaa171.
7
Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
8
fastp: an ultra-fast all-in-one FASTQ preprocessor.fastp：一个超快速的一体化 FASTQ 预处理程序。
Bioinformatics. 2018 Sep 1;34(17):i884-i890. doi: 10.1093/bioinformatics/bty560.
9
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.DFAST：一个灵活的原核生物基因组注释管道，用于更快地发布基因组。
Bioinformatics. 2018 Mar 15;34(6):1037-1039. doi: 10.1093/bioinformatics/btx713.
10
Draft Genome Sequence of Non-Vibrio parahaemolyticus Acute Hepatopancreatic Necrosis Disease Strain KC13.17.5, Isolated from Diseased Shrimp in Vietnam.从越南患病虾中分离出的非副溶血性弧菌急性肝胰腺坏死病菌株KC13.17.5的基因组序列草图
Genome Announc. 2015 Sep 17;3(5):e00978-15. doi: 10.1128/genomeA.00978-15.

从日本对虾中分离出的TUMSAT-2019菌株的基因组序列。

Genome sequence of strain TUMSAT-2019, isolated from kuruma shrimp, .

作者信息

Yuasa Hajime, Koiwai Keiichiro, Konishi Kayo, Furukawa Miho, Nozaki Reiko, Kondo Hidehiro, Hirono Ikuo

机构信息

Laboratory of Genome Science, Tokyo University of Marine Science and Technology, Tokyo, Japan.

出版信息

Microbiol Resour Announc. 2025 Feb 11;14(2):e0074624. doi: 10.1128/mra.00746-24. Epub 2024 Dec 20.

DOI:10.1128/mra.00746-24
PMID:39705162
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11812306/
Abstract

The Gram-negative bacterium is a serious shrimp pathogen. Here, we present the genome sequence of TUMSAT-2019, which was isolated from a kuruma shrimp () that originated from a shrimp farm in Okinawa Prefecture. The assembly totaled 5.7 Mbp, consisting of two chromosomes with no plasmid.

摘要

这种革兰氏阴性菌是对虾的一种严重病原体。在此，我们展示了TUMSAT-2019的基因组序列，它是从一只源自冲绳县一个养虾场的日本对虾（）中分离出来的。组装后的基因组总计570万碱基对，由两条染色体组成，无质粒。