Venkataraman Maya, Infante Valentina, Sabat Grzegorz, Sanos-Giles Kai, Ané Jean-Michel, Pfleger Brian F
Department of Chemical and Biological Engineering, University of Wisconsin - Madison, Madison, Wisconsin 53706, United States.
Department of Bacteriology, University of Wisconsin - Madison, Madison, Wisconsin 53706, United States.
ACS Synth Biol. 2025 Jan 17;14(1):206-215. doi: 10.1021/acssynbio.4c00489. Epub 2024 Dec 21.
The soil environment affected by plant roots and their exudates, termed the rhizosphere, significantly impacts crop health and is an attractive target for engineering desirable agricultural traits. Engineering microbes in the rhizosphere is one approach to improving crop yields that directly minimizes the number of genetic modifications made to plants. Soil microbes have the potential to assist with nutrient acquisition, heat tolerance, and drought response if they can persist in the rhizosphere in the correct numbers. Unfortunately, the mechanisms by which microbes adhere and persist on plant roots are poorly understood, limiting their application. This study examined the membrane proteome shift upon adherence to roots in two bacteria of interest, and From this surface proteome data, we identified a novel membrane protein from a nonlaboratory isolate of that increases binding to maize roots using unlabeled proteomics. When this protein was moved from the environmental isolate to a common lab strain ( KT2440), we observed increased binding capabilities of KT2440 to both abiotic mimic surfaces and maize roots. We observed a similar increased binding capability to maize roots when the protein was heterologously expressed in and . With the discovery of this novel binding protein, we outline a strategy for harnessing natural selection and wild isolates to build more persistent strains of bacteria for field applications and plant growth promotion.
受植物根系及其分泌物影响的土壤环境,即根际,对作物健康有重大影响,是改良理想农业性状的一个有吸引力的目标。对根际微生物进行工程改造是提高作物产量的一种方法,这种方法能直接减少对植物进行基因改造的数量。如果土壤微生物能够以合适的数量在根际持续存在,它们就有潜力帮助植物获取养分、耐热及应对干旱。不幸的是,人们对微生物附着并在植物根系上持续存在的机制了解甚少,这限制了它们的应用。本研究检测了两种目标细菌在附着于根系时的膜蛋白质组变化。根据这些表面蛋白质组数据,我们利用非标记蛋白质组学方法,从一种非实验室分离株的 中鉴定出一种新的膜蛋白,该蛋白能增强与玉米根系的结合。当将这种蛋白从环境分离株转移到常见的实验室菌株(KT2440)时,我们观察到KT2440对非生物模拟表面和玉米根系的结合能力增强。当该蛋白在 和 中异源表达时,我们也观察到其对玉米根系的结合能力有类似的增强。随着这种新型结合蛋白的发现,我们概述了一种利用自然选择和野生分离株构建更持久的细菌菌株用于田间应用和促进植物生长的策略。