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基于采样、处理、孵育、检测和侧向流免疫分析平台建立基于样本到答案环介导等温扩增的核酸检测方法。

Establishment of Sample-to-Answer Loop-Mediated Isothermal Amplification-Based Nucleic Acid Testing Using the Sampling, Processing, Incubation, Detection and Lateral Flow Immunoassay Platforms.

作者信息

Pommiès Lilas, Boutal Hervé, Fras David, Volland Hervé

机构信息

CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), Université Paris-Saclay, SPI, 91191 Gif-sur-Yvette, France.

CEA/DRT/LIST/DIN/SIMRI, 91191 Gif-Sur-Yvette, France.

出版信息

Biosensors (Basel). 2024 Dec 13;14(12):609. doi: 10.3390/bios14120609.

DOI:10.3390/bios14120609
PMID:39727874
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11674888/
Abstract

Diagnostics often require specialized equipment and trained personnel in laboratory settings, creating a growing need for point-of-care tests (POCTs). Among the genetic testing methods available, Loop-mediated Isothermal Amplification (LAMP) offers a viable solution for developing genetic POCT due to its compatibility with simplified devices. This study aimed to create a genetic test that integrates all steps from sample processing to analyzing results while minimizing the complexity, handling, equipment, and time required. Several challenges were addressed to achieve this goal: (1) the development of a buffer for bacterial DNA extraction that is compatible with both LAMP and immunochromatographic tests; (2) the adaption of the LAMP protocol for use with the SPID device; and (3) the optimization of the detection protocol for specific test conditions, with a lateral flow immunoassay format selected for its POCT compatibility. Following these developments, the test was validated using () and non- strains. A portable heating station was also developed to enable amplification without costly equipment. The resulting genetic POCT achieved 100% sensitivity and 85% specificity, with results available in 60 to 75 min. This study demonstrated that our POCT efficiently performs DNA extraction, amplification, and detection for bacterial identification. The test's simplicity and cost-effectiveness will support its implementation in various settings.

摘要

诊断通常需要在实验室环境中使用专门的设备和经过培训的人员,这使得即时检验(POCT)的需求日益增长。在现有的基因检测方法中,环介导等温扩增技术(LAMP)因其与简化设备的兼容性,为开发基因POCT提供了一个可行的解决方案。本研究旨在创建一种基因检测方法,该方法将从样本处理到结果分析的所有步骤整合在一起,同时将所需的复杂性、操作、设备和时间降至最低。为实现这一目标,解决了几个挑战:(1)开发一种与LAMP和免疫层析检测均兼容的用于细菌DNA提取的缓冲液;(2)使LAMP方案适用于SPID设备;(3)针对特定测试条件优化检测方案,选择侧向流动免疫分析形式以实现与POCT的兼容性。经过这些改进后,使用()和非菌株对该检测方法进行了验证。还开发了一个便携式加热站,以便在无需昂贵设备的情况下进行扩增。最终的基因POCT实现了100%的灵敏度和85%的特异性,60至75分钟内即可获得结果。本研究表明,我们的POCT能够有效地进行DNA提取、扩增和检测以用于细菌鉴定。该检测方法的简单性和成本效益将支持其在各种环境中的应用。

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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fdb/11674888/378c6a9b964f/biosensors-14-00609-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fdb/11674888/ca7b220b060c/biosensors-14-00609-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fdb/11674888/264b4a4c2d96/biosensors-14-00609-g008.jpg
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