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对源自印度尼西亚海洋无脊椎动物的生物活性化合物作为新型抗结核药物的计算机模拟研究。

In silico study of bioactive compounds derived from Indonesian marine invertebrates as a novel antituberculosis agent.

作者信息

Masyita Ayu, Septiana Eris, Bayu Asep, Bustanussalam Bustanussalam, Panggabean Jonathan A, Firdayani Firdayani, Murniasih Tutik

机构信息

Research Center for Vaccine and Drugs, Research Organization for Health, National Research and Innovation Agency (BRIN), Cibinong, Bogor, Indonesia.

Department of Pharmaceutical Sciences, Faculty of Pharmacy, Hasanuddin University, Makassar, Indonesia.

出版信息

Turk J Med Sci. 2024 Sep 20;54(6):1399-1408. doi: 10.55730/1300-0144.5923. eCollection 2024.

DOI:10.55730/1300-0144.5923
PMID:39734349
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11673630/
Abstract

BACKGROUND/AIM: Tuberculosis (TB) has become the world's deadliest disease. The lack of an effective therapeutic drug to treat it is one of the obstacle for doctors. Today, multidrug-resistant TB cases are increasing. Investigating these new drug should be given intensive and careful consideration. Marine invertebrates are valuable since they produce a large number of active compounds, and screening of these active compounds is very important.

MATERIALS AND METHODS

Anti-TB screening of compounds derived from marine invertebrates was performed via the in silico method. Three-dimensional structures of pantothenate kinase (MtPanK type 1, PDB ID: 4BFT), InhA (PDB ID: 2X23), protein kinase B (PDB ID: 5U94), and β-ketoacyl acyl carrier protein synthase I (MtKasA, PDB ID: 2WGE) were used as the protein targeted receptors.

RESULTS

The molecular docking analysis showed that the potential candidate compounds with the lowest docking score were 19-hydroxypsammaplysin Q, 19-hydroxypsammaplysin S, psammaplysin L, and psammaplysin K dimethoxy acetal. Several compounds, such as molamide C and the manzamine group, are also potential anti-TB compounds.

CONCLUSION

This study showed that psammaplysin groups have potential as anti-TB compounds. Further laboratory experiments should be done to confirm the in silico data.

摘要

背景/目的:结核病已成为全球最致命的疾病。缺乏有效的治疗药物是医生面临的障碍之一。如今,耐多药结核病病例正在增加。对这些新药的研究应给予深入且谨慎的考虑。海洋无脊椎动物很有价值,因为它们能产生大量活性化合物,对这些活性化合物进行筛选非常重要。

材料与方法

通过计算机模拟方法对源自海洋无脊椎动物的化合物进行抗结核筛选。以泛酸激酶(1型结核分枝杆菌泛酸激酶,PDB编号:4BFT)、InhA(PDB编号:2X23)、蛋白激酶B(PDB编号:5U94)和β-酮酰基酰基载体蛋白合成酶I(结核分枝杆菌KasA,PDB编号:2WGE)的三维结构作为蛋白质靶向受体。

结果

分子对接分析表明,对接分数最低的潜在候选化合物为19-羟基沙海葵毒素Q、19-羟基沙海葵毒素S、沙海葵毒素L和沙海葵毒素K二甲氧基缩醛。几种化合物,如莫拉酰胺C和曼赞胺类,也是潜在的抗结核化合物。

结论

本研究表明沙海葵毒素类化合物具有作为抗结核化合物的潜力。应进行进一步的实验室实验以证实计算机模拟数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ad3/11673630/d78728acf938/tjmed-54-06-1399f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ad3/11673630/ae7548a745f7/tjmed-54-06-1399f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ad3/11673630/d78728acf938/tjmed-54-06-1399f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ad3/11673630/ae7548a745f7/tjmed-54-06-1399f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ad3/11673630/d78728acf938/tjmed-54-06-1399f2.jpg

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