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用红豆杉tRNA片段靶向NUCKS1治疗结直肠癌。

Targeting NUCKS1 with a fragment of tRNA of Chinese yew for the treatment of colorectal cancer.

作者信息

Cao Kai-Yue, Zhang Da, Bai Long-Bo, Yan Tong-Meng, Chen Yan, Jiang Yu-Yang, Jiang Zhi-Hong

机构信息

State Key Laboratory of Quality Research in Chinese Medicine, Macau University of Science and Technology, Avenida Wai Long, Taipa, Macau SAR, China.

School of Pharmacy, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China.

出版信息

Noncoding RNA Res. 2024 Nov 12;11:38-47. doi: 10.1016/j.ncrna.2024.11.002. eCollection 2025 Apr.

DOI:10.1016/j.ncrna.2024.11.002
PMID:39736854
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11683283/
Abstract

Despite the discovery of numerous oncogenes in colorectal cancer (CRC), the development of associated drugs is limited, posing a significant challenge for CRC treatment. Identification of novel druggable targets is therefore crucial for the therapeutic development of CRC. Here, we report the first investigation on therapeutics targeting the potent oncogene NUCKS1 to suppress cancer progression. NUCKS1-orientated bioinformatics screening of NUCKS1 inhibitors from our library of tRNA fragments originated from medicinal plants identified tRF-T36, a 5' tRNA fragment of tRNA of Chinese yew (), exhibiting stronger inhibitory effects than taxol against CRC progression. Mechanistically, tRF-T36 binds directly to the 3' UTR of NUCKS1 mRNA to downregulate its expressions RNAi pathway. High-throughput RNA sequencing indicated that the downregulated NUCKS1 induced by tRF-T36 further inhibits PI3K/Akt pathway, as verified by the significantly efficacy decrease of tRF-T36 mimic in co-treatment with 740Y-P, an agonist of PI3K/Akt pathway. Collectively, our findings emphasize the importance of NUCKS1 as a promising druggable target for CRC. Furthermore, the present study provides the first siRNA sequence, tRF-T36 mimic, as small RNA drug candidate, thereby shedding light on CRC therapeutics.

摘要

尽管在结直肠癌(CRC)中发现了众多致癌基因,但相关药物的开发仍然有限,这给CRC的治疗带来了重大挑战。因此,鉴定新的可成药靶点对于CRC的治疗发展至关重要。在此,我们报告了首次针对强效致癌基因NUCKS1进行治疗以抑制癌症进展的研究。从我们源自药用植物的tRNA片段文库中对NUCKS1抑制剂进行基于NUCKS1的生物信息学筛选,鉴定出tRF-T36,即红豆杉tRNA的5' tRNA片段,其对CRC进展的抑制作用比紫杉醇更强。机制上,tRF-T36直接与NUCKS1 mRNA的3' UTR结合,通过RNAi途径下调其表达。高通量RNA测序表明,tRF-T36诱导的NUCKS1下调进一步抑制PI3K/Akt途径,PI3K/Akt途径激动剂740Y-P与tRF-T36模拟物联合处理时显著的疗效降低证实了这一点。总体而言,我们的研究结果强调了NUCKS1作为CRC一个有前景的可成药靶点的重要性。此外,本研究提供了首个siRNA序列,即tRF-T36模拟物,作为小RNA药物候选物,从而为CRC治疗提供了线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/7d135e4440df/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/a58d801c5b14/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/a7a80261be63/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/cd7616012cb5/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/9da56b212e3a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/447db8d06c04/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/7d135e4440df/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/a58d801c5b14/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/a7a80261be63/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/cd7616012cb5/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/9da56b212e3a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/447db8d06c04/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e89/11683283/7d135e4440df/gr6.jpg

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本文引用的文献

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NUCKS1, a LINC00629-upregulated gene, facilitated osteosarcoma progression and metastasis by elevating asparagine synthesis.NUCKS1,一个受 LINC00629 上调的基因,通过提高天冬酰胺合成促进骨肉瘤的进展和转移。
Cell Death Dis. 2023 Aug 1;14(8):489. doi: 10.1038/s41419-023-06010-9.
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Colorectal cancer statistics, 2023.2023 年结直肠癌统计数据。
CA Cancer J Clin. 2023 May-Jun;73(3):233-254. doi: 10.3322/caac.21772. Epub 2023 Mar 1.
3
The role of post-transcriptional modification on a new tRNA identified from Ganoderma lucidum in its fragments' cytotoxicity on cancer cells.
转录后修饰对从灵芝中鉴定出的一种新tRNA片段对癌细胞细胞毒性的作用。
Int J Biol Macromol. 2023 Feb 28;229:885-895. doi: 10.1016/j.ijbiomac.2022.12.327. Epub 2023 Jan 2.
4
A tRNA-derived fragment of ginseng protects heart against ischemia/reperfusion injury via targeting the lncRNA MIAT/VEGFA pathway.人参来源的一种tRNA衍生片段通过靶向长链非编码RNA MIAT/血管内皮生长因子A(VEGFA)途径保护心脏免受缺血/再灌注损伤。
Mol Ther Nucleic Acids. 2022 Aug 13;29:672-688. doi: 10.1016/j.omtn.2022.08.014. eCollection 2022 Sep 13.
5
Hsa_circ_0001550 facilitates colorectal cancer progression through mediating microRNA-4262/nuclear casein kinase and cyclin-dependent kinase substrate 1 cascade.Hsa_circ_0001550 通过介导 microRNA-4262/核酪蛋白激酶和细胞周期蛋白依赖性激酶底物 1 级联促进结直肠癌进展。
J Clin Lab Anal. 2022 Jul;36(7):e24532. doi: 10.1002/jcla.24532. Epub 2022 Jun 13.
6
A tRNA-derived fragment from Chinese yew suppresses ovarian cancer growth via targeting .来自中国红豆杉的一种tRNA衍生片段通过靶向……抑制卵巢癌生长。
Mol Ther Nucleic Acids. 2022 Jan 3;27:718-732. doi: 10.1016/j.omtn.2021.12.037. eCollection 2022 Mar 8.
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miR-641 Inhibited Cell Proliferation and Induced Apoptosis by Targeting NUCKS1/PI3K/AKT Signaling Pathway in Breast Cancer.miR-641 通过靶向 NUCKS1/PI3K/AKT 信号通路抑制乳腺癌细胞增殖并诱导细胞凋亡。
Comput Math Methods Med. 2022 Jan 12;2022:5203839. doi: 10.1155/2022/5203839. eCollection 2022.
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Upregulation of NUCKS1 in Lung Adenocarcinoma is Associated with a Poor Prognosis.肺腺癌中 NUCKS1 的上调与不良预后相关。
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