Kim Sibeen, Kim Inkyeong, Yuh Woon Tak, Han Sangmin, Kim Choonghyo, Ko Young San, Cho Wonwoo, Park Sung Bae
School of Biomedical Engineering, Korea University, Seoul, Republic of Korea.
Department of Neurosurgery, Kangwon National University Hospital, Chuncheon-si, Gangwon-do, Republic of Korea.
Sci Rep. 2024 Dec 30;14(1):31820. doi: 10.1038/s41598-024-82902-w.
Vertebral collapse (VC) following osteoporotic vertebral compression fracture (OVCF) often requires aggressive treatment, necessitating an accurate prediction for early intervention. This study aimed to develop a predictive model leveraging deep neural networks to predict VC progression after OVCF using magnetic resonance imaging (MRI) and clinical data. Among 245 enrolled patients with acute OVCF, data from 200 patients were used for the development dataset, and data from 45 patients were used for the test dataset. To construct an accurate prediction model, we explored two backbone architectures: convolutional neural networks and vision transformers (ViTs), along with various pre-trained weights and fine-tuning methods. Through extensive experiments, we built our model by performing parameter-efficient fine-tuning of a ViT model pre-trained on a large-scale biomedical dataset. Attention rollouts indicated that the contours and internal features of the compressed vertebral body were critical in predicting VC with this model. To further improve the prediction performance of our model, we applied the augmented prediction strategy, which uses multiple MRI frames and achieves a significantly higher area under the curve (AUC). Our findings suggest that employing a biomedical foundation model fine-tuned using a parameter-efficient method, along with augmented prediction, can significantly enhance medical decisions.
骨质疏松性椎体压缩骨折(OVCF)后的椎体塌陷(VC)通常需要积极治疗,因此需要进行准确预测以便早期干预。本研究旨在开发一种利用深度神经网络的预测模型,使用磁共振成像(MRI)和临床数据预测OVCF后的VC进展。在245名纳入研究的急性OVCF患者中,200名患者的数据用于开发数据集,45名患者的数据用于测试数据集。为构建准确的预测模型,我们探索了两种骨干架构:卷积神经网络和视觉Transformer(ViT),以及各种预训练权重和微调方法。通过广泛实验,我们通过对在大规模生物医学数据集上预训练的ViT模型进行参数高效微调来构建模型。注意力展示表明,压缩椎体的轮廓和内部特征对于用该模型预测VC至关重要。为进一步提高我们模型的预测性能,我们应用了增强预测策略,该策略使用多个MRI帧并显著提高了曲线下面积(AUC)。我们的研究结果表明,采用通过参数高效方法微调的生物医学基础模型以及增强预测,可以显著改善医疗决策。