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基于单倍型分析的遗传性心血管疾病植入前基因检测:一种多学科方法。

Haplotyping-based preimplantation genetic testing for inherited cardiovascular disease: a multidisciplinary approach.

作者信息

Liu Han, Bao Xiao, Shi Hao, Niu Wenbin, Bu Zhiqin, Yang Jingya, Zhang Yuxin, Jin Haixia, Song Wenyan, Sun Yingpu

机构信息

Center for Reproductive Medicine, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, Zhengzhou, 450052, Henan, China.

Henan Key Laboratory of Reproduction and Genetics, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, Henan, China.

出版信息

Mol Genet Genomics. 2024 Dec 30;300(1):11. doi: 10.1007/s00438-024-02208-4.

DOI:10.1007/s00438-024-02208-4
PMID:39738666
Abstract

Given the high morbidity, mortality, and hereditary risk of cardiovascular diseases (CVDs), their prevention and control have garnered widespread attention and remain central to clinical research. This study aims to assess the feasibility and necessity of haplotyping-based preimplantation genetic testing for the prevention of inherited CVD. A total of 15 preimplantation genetic testing for monogenic defect (PGT-M) cycles were performed in 12 CVD families from January 2016 to July 2022. All couples were affected by CVDs and carried specific causative genes (including MYH7, MYBPC3, TTN, TPM1, LMNA, KCNQ1, FBN1 and LDLR). Among the 10 couples with adequate genetic pedigree information, we utilized the karyomapping assay to obtain single-nucleotide polymorphisms (SNPs) allele data. For the 2 couples who had no reference in their family, we used single sperm next-generation sequencing (NGS) to realize haplotype construction. Linkage analysis was performed to deduce embryonic genotype, and aneuploidy was screened simultaneously. Prenatal diagnostic testing via amniocentesis at 18-22 weeks of gestation was performed to verify the genetic conditions of transferred embryos. In total, 120 embryos were examined in this study, and the results showed that only 26.7% (32/120) were mutation-free and euploid-confirmed embryos. Additionally, for female CVD patients, we convened a multidisciplinary team (MDT) to advise the couple on their fertility concerns and management measures during pregnancy and delivery. With our cooperation, 10 couples successfully obtained healthy babies not carrying the pathogenic mutations. The results of prenatal diagnostics were consistent with the results of PGT-M. Our study demonstrates that PGT-M based on haplotype analysis is reliable and necessary for the prevention of inherited CVDs. It also highlights the important value of multidisciplinary collaboration for CVD prevention and treatment. Inherited cardiovascular diseases (CVDs) present as a huge challenge for modern medical and health systems. Hundreds of genetic variants have been reported to cause CVD and the number of people with the disease is enormous and still on the rise globally. Here we recruited twelve couples suffering from inherited CVD and provided them with effective pre-implantation genetic testing for monogenic defect (PGT-M) strategy to avoid the occurrence of genetic defects in the offspring. Specifically, after embryo biopsy, we utilized karyomapping assay (for 10 couples with a family history) or next-generation sequencing (NGS) (for 2 couples having no reference in their pedigree) to obtain single-nucleotide polymorphisms (SNPs) allele data and then performed linkage analysis to deduce embryonic genotype. A total of 120 embryos from 15 PGT-M cycles were examined and 12 variants in 8 genes linked to inherited CVD were identified. Thirty-two mutation-free and euploid confirmed embryos were considered suitable for embryo transfer. Besides, for female CVD patients, we called up a multidisciplinary team (MDT) advising the couple on their fertility concerns and management measures of pregnancy and delivery. With our cooperation, 10 couples successfully obtain healthy babies not carrying the pathogenic mutations. Our study further validated the reliability of PGT-M utilizing linkage analysis as a means to prevent the transmission of genetic disorders to future generations, and offered valuable insights for multidisciplinary clinical practices on CVD.

摘要

鉴于心血管疾病(CVD)的高发病率、高死亡率和遗传风险,其预防和控制已受到广泛关注,并且仍然是临床研究的核心。本研究旨在评估基于单倍型分析的植入前基因检测对预防遗传性心血管疾病的可行性和必要性。2016年1月至2022年7月,对12个心血管疾病家庭共进行了15个单基因缺陷植入前基因检测(PGT-M)周期。所有夫妇均患有心血管疾病并携带特定致病基因(包括MYH7、MYBPC3、TTN、TPM1、LMNA、KCNQ1、FBN1和LDLR)。在10对具有充分遗传谱系信息的夫妇中,我们利用核型定位分析获得单核苷酸多态性(SNP)等位基因数据。对于2对家族中无参考对象的夫妇,我们使用单精子下一代测序(NGS)来实现单倍型构建。进行连锁分析以推断胚胎基因型,并同时筛查非整倍体。在妊娠18 - 22周时通过羊膜穿刺术进行产前诊断检测,以验证移植胚胎的遗传状况。本研究共检测了120个胚胎,结果显示只有26.7%(32/120)是无突变且经确认的整倍体胚胎。此外,对于患有心血管疾病的女性患者,我们组建了一个多学科团队(MDT),就她们在妊娠和分娩期间的生育问题及管理措施向夫妇提供建议。通过我们的合作,10对夫妇成功获得了未携带致病突变的健康婴儿。产前诊断结果与PGT-M结果一致。我们的研究表明,基于单倍型分析的PGT-M对于预防遗传性心血管疾病是可靠且必要的。它还凸显了多学科协作在心血管疾病防治中的重要价值。遗传性心血管疾病对现代医疗卫生系统构成了巨大挑战。据报道,数百种基因变异可导致心血管疾病,且患病人数众多,全球范围内仍在上升。在此,我们招募了12对患有遗传性心血管疾病的夫妇,并为他们提供了有效的单基因缺陷植入前基因检测(PGT-M)策略,以避免后代出现基因缺陷。具体而言,在胚胎活检后,我们利用核型定位分析(针对10对有家族病史的夫妇)或下一代测序(NGS)(针对2对家族中无参考对象的夫妇)来获得单核苷酸多态性(SNP)等位基因数据,然后进行连锁分析以推断胚胎基因型。对15个PGT-M周期中的120个胚胎进行了检测,共鉴定出8个与遗传性心血管疾病相关基因中的12个变异。32个无突变且经确认的整倍体胚胎被认为适合胚胎移植。此外,对于患有心血管疾病的女性患者,我们召集了一个多学科团队(MDT),就她们在生育方面的担忧以及妊娠和分娩的管理措施向夫妇提供建议。通过我们的合作,10对夫妇成功获得了未携带致病突变的健康婴儿。我们的研究进一步验证了利用连锁分析进行PGT-M预防遗传疾病向下一代传递的可靠性,并为心血管疾病的多学科临床实践提供了有价值的见解。

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Appropriate whole genome amplification and pathogenic loci detection can improve the accuracy of preimplantation genetic diagnosis for deletional α-thalassemia.适当的全基因组扩增和致病基因座检测可提高缺失型α-地中海贫血症胚胎植入前遗传学诊断的准确性。
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一种通过荧光缺口聚合酶链反应结合单倍型分析对东南亚型α地中海贫血进行全面植入前基因检测的方法。
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