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抗病毒药物:作用的结构基础与合理设计

Antiviral Agents: Structural Basis of Action and Rational Design.

作者信息

Menéndez-Arias Luis, Gago Federico

机构信息

Centro de Biología Molecular "Severo Ochoa" (Consejo Superior de Investigaciones Científicas and Universidad Autónoma de Madrid), Madrid, Spain.

Department of Biomedical Sciences, Universidad de Alcalá, Alcalá de Henares, Madrid, Spain.

出版信息

Subcell Biochem. 2024;105:745-784. doi: 10.1007/978-3-031-65187-8_20.

DOI:10.1007/978-3-031-65187-8_20
PMID:39738962
Abstract

During the last forty years, significant progress has been made in the development of novel antiviral drugs, mainly crystallizing in the establishment of potent antiretroviral therapies and the approval of drugs eradicating hepatitis C virus infection. Although major targets of antiviral intervention involve intracellular processes required for the synthesis of viral proteins and nucleic acids, a number of inhibitors blocking virus assembly, budding, maturation, entry, or uncoating act on virions or viral capsids. In this review, we focus on the drug discovery process while presenting the currently used methodologies to identify novel antiviral drugs by means of computer-based approaches. We provide examples illustrating structure-based antiviral drug development, specifically neuraminidase inhibitors against influenza virus (e.g., oseltamivir and zanamivir) and human immunodeficiency virus type 1 protease inhibitors (i.e., the development of darunavir from early peptidomimetic compounds such as saquinavir). A number of drugs acting against hepatitis B virus and human immunodeficiency virus and their mechanism of action are presented to show how viral capsids can be exploited as targets of antiviral therapy. The recent approval of the antiretroviral drug lenacapavir illustrates the successful application of this knowledge.

摘要

在过去四十年中,新型抗病毒药物的研发取得了重大进展,主要体现在高效抗逆转录病毒疗法的建立以及根除丙型肝炎病毒感染的药物获批。尽管抗病毒干预的主要靶点涉及病毒蛋白和核酸合成所需的细胞内过程,但一些阻断病毒组装、出芽、成熟、进入或脱壳的抑制剂作用于病毒粒子或病毒衣壳。在这篇综述中,我们聚焦于药物发现过程,同时介绍目前通过基于计算机的方法来鉴定新型抗病毒药物的常用方法。我们提供了基于结构的抗病毒药物开发的示例,特别是针对流感病毒的神经氨酸酶抑制剂(如奥司他韦和扎那米韦)以及1型人类免疫缺陷病毒蛋白酶抑制剂(即从早期肽模拟化合物如沙奎那韦开发出地瑞那韦)。还介绍了一些针对乙型肝炎病毒和人类免疫缺陷病毒的药物及其作用机制,以展示病毒衣壳如何被用作抗病毒治疗的靶点。抗逆转录病毒药物来那卡帕韦最近获批,说明了这一知识的成功应用。

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本文引用的文献

1
Targeting hepatitis B virus cccDNA levels: Recent progress in seeking small molecule drug candidates.靶向乙型肝炎病毒共价闭合环状 DNA:小分子药物候选物的研究进展。
Drug Discov Today. 2023 Jul;28(7):103617. doi: 10.1016/j.drudis.2023.103617. Epub 2023 May 15.
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Therapeutics for COVID-19.治疗 COVID-19 的方法。
Nat Microbiol. 2023 May;8(5):771-786. doi: 10.1038/s41564-023-01356-4. Epub 2023 May 4.
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An Overview of Antivirals against Monkeypox Virus and Other Orthopoxviruses.抗猴痘病毒及其他正痘病毒的抗病毒药物概述
J Med Chem. 2023 Apr 13;66(7):4468-4490. doi: 10.1021/acs.jmedchem.3c00069. Epub 2023 Mar 24.
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Computer-Aided Drug Design: An Update.计算机辅助药物设计:更新。
Methods Mol Biol. 2023;2601:123-152. doi: 10.1007/978-1-0716-2855-3_7.
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Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir.HIV-1 衣壳抑制剂 Lenacapavir 耐药性的结构与机制基础。
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Co-opted membranes, lipids, and host proteins: what have we learned from tombusviruses?被征用的膜、脂质和宿主蛋白:我们从番茄丛矮病毒中学到了什么?
Curr Opin Virol. 2022 Oct;56:101258. doi: 10.1016/j.coviro.2022.101258. Epub 2022 Sep 24.
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Resistance Analyses in Highly Treatment-Experienced People With Human Immunodeficiency Virus (HIV) Treated With the Novel Capsid HIV Inhibitor Lenacapavir.高效抗逆转录病毒治疗(Highly active antiretroviral therapy,HAART)经验丰富的人类免疫缺陷病毒(HIV)感染者应用新型衣壳抑制剂 Lenacapavir 的耐药性分析。
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Rationale of using the dual chemokine receptor CCR2/CCR5 inhibitor cenicriviroc for the treatment of COVID-19.使用双重趋化因子受体 CCR2/CCR5 抑制剂 cenicriviroc 治疗 COVID-19 的原理。
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Organotropic dendrons with high potency as HIV-1, HIV-2 and EV-A71 cell entry inhibitors.具有高效力的组织亲和性树突作为 HIV-1、HIV-2 和 EV-A71 细胞进入抑制剂。
Eur J Med Chem. 2022 Jul 5;237:114414. doi: 10.1016/j.ejmech.2022.114414. Epub 2022 Apr 27.
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Lethal Mutagenesis of RNA Viruses and Approved Drugs with Antiviral Mutagenic Activity.RNA 病毒的致死性诱变和具有抗病毒诱变活性的已批准药物。
Viruses. 2022 Apr 18;14(4):841. doi: 10.3390/v14040841.