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全基因组鉴定、进化及表达分析揭示了基因在氮利用和氮分配中的作用。

Genome-wide identification, evolution and expression analysis unveil the role of genes in nitrogen utilization and nitrogen allocation.

作者信息

Wang Boya, Ren Siyuan, Chen Sen, Hao Suwei, Xu Gang, Hu Shanglian, Cao Ying

机构信息

School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010 Sichuan Province China.

出版信息

Physiol Mol Biol Plants. 2024 Dec;30(12):1983-1999. doi: 10.1007/s12298-024-01541-7. Epub 2024 Dec 17.

Abstract

UNLABELLED

The rapid growth of Bamboo made the uptake and allocation of nitrogen much important. Nitrate is the main form that plant utilized nitrogen by nitrate transporters (NRTs) as well as ammonium salt. In this study, we identified 155 genes which mapped to 32 chromosomes out of 35 chromosomes in . Collinearity analysis showed most genes in paired with genes in and , which another two sequenced woody bamboo species, and the divergence was similar to the woody bamboo whole-genome duplication event. Through the N-nitrate trace analysis, we found that the nitrogen absorbed by roots in was preferentially distributed to above-ground parts, especially transported to leaves. and exhibited higher expression in leaf, and upregulated with extra N supply, suggesting they might be participating in N allocation between leaves in . This study provides a foundation for understanding the mechanism of nitrate transport and distribution in bamboo, and provide valuable information for improving bamboo nitrate absorption and promoting efficient nitrogen utilization.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s12298-024-01541-7.

摘要

未标注

竹子的快速生长使得氮的吸收和分配变得非常重要。硝酸盐是植物通过硝酸盐转运蛋白(NRTs)利用氮的主要形式,铵盐也是。在本研究中,我们在[具体竹子物种]的35条染色体中鉴定出155个基因,这些基因分布在32条染色体上。共线性分析表明,[具体竹子物种]中的大多数基因与另外两个已测序的木本竹种[具体竹子物种1]和[具体竹子物种2]中的基因配对,且这种差异与木本竹全基因组复制事件相似。通过氮-硝酸盐追踪分析,我们发现[具体竹子物种]根系吸收的氮优先分配到地上部分,尤其是运输到叶片。[具体基因1]和[具体基因2]在叶片中表现出较高的表达,并且随着额外氮供应而上调,这表明它们可能参与了[具体竹子物种]叶片间的氮分配。本研究为理解竹子中硝酸盐运输和分配的机制提供了基础,并为提高竹子对硝酸盐的吸收和促进氮的高效利用提供了有价值的信息。

补充信息

在线版本包含可在10.1007/s12298-024-01541-7获取的补充材料。

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