Ichinose Toshiharu, Tanimoto Hiromu
Frontier Research Institute for Interdisciplinary Sciences, Tohoku University, Aramaki-Aoba 6-3, 980-8578, Sendai, Miyagi, Japan.
Graduate School of Life Sciences, Tohoku University, Katahira 2-1-1, 980-8577, Sendai, Miyagi, Japan.
J Biochem. 2025 Apr 2;177(4):239-246. doi: 10.1093/jb/mvae096.
Regulation at the level of translation is critical in the nervous system, such as for the formation of cell-type-specific proteomes or plastic changes in neural circuits. Whilst current knowledge of the translatome is relatively limited compared to transcriptome, a growing array of tools to analyse translation is becoming available. In this review, we discuss techniques for profiling translation on a genome-wide scale with a special emphasis on cell-type-specific analyses in the nervous system. This includes polysome-profiling-seq, Translating Ribosome Affinity Purification (TRAP)-seq and ribosome profiling (Ribo-seq). We review recent advances to achieve spatial resolution of translatome analysis, such as genetic labelling of the targeted cells and cell sorting, and discuss the biological implications of translational regulation in the brain and potential future extensions.
在神经系统中,翻译水平的调控至关重要,例如对于细胞类型特异性蛋白质组的形成或神经回路的可塑性变化。虽然与转录组相比,目前对翻译组的了解相对有限,但越来越多的分析翻译的工具正在出现。在这篇综述中,我们讨论了在全基因组范围内分析翻译的技术,特别强调了神经系统中细胞类型特异性分析。这包括多核糖体分析测序、翻译核糖体亲和纯化(TRAP)测序和核糖体分析(Ribo-seq)。我们回顾了实现翻译组分析空间分辨率的最新进展,如靶向细胞的遗传标记和细胞分选,并讨论了大脑中翻译调控的生物学意义以及潜在的未来扩展。