Tian Zhihui, Yang Lili, Yang Rong, Yang Wenhui
Department of Gastroenterology, Shanxi Hospital Affiliated to Cancer Hospital, Shanxi Province Cancer Hospital, Chinese Academy of Medical Sciences, Cancer Hospital Affiliated to Shanxi Medical University, Taiyuan City, 030013, Shanxi Province, China.
Department of Gastroenterology, Shanxi Hospital Affiliated to Cancer Hospital, Shanxi Province Cancer Hospital, Chinese Academy of Medical Sciences, Cancer Hospital, Shanxi Medical University, No.3, Staff New Street, Xinghualing District, Taiyuan City, 030000, Shanxi Province, China.
Sci Rep. 2025 Jan 2;15(1):180. doi: 10.1038/s41598-024-84613-8.
The mismatch repair (MMR) system plays a crucial role in the maintenance of DNA replication fidelity and genomic stability. The clinical value of the MMR molecular marker as an immunotherapy for advanced solid tumors has been documented. However, this therapy is not effective in some patients. This study aimed to develop an MMR-related molecular prognostic model for identifying appropriate populations of stomach adenocarcinoma (STAD) for better treatment outcome. The MMR genes expression data were downloaded from TCGA and CCLE databases. The expression of four MMR genes, construction of a prognostic risk model, and assessment of immune infiltration in STAD were performed using Xiantao online tool. GEPIA2 was used to explore the association of MMR genes expression with clinical stage and overall survival. The frequency and prognostic value of MMR genes in STAD were conducted on the cBioPortal. The MLH1 co-expression network was established based on the LinkedOmics database. This study found that the expression of MSH2, MSH6 and PMS2 was up-regulated in STAD tissues. Moreover, differential MMR genetic expression levels were not significantly correlated with the clinical stages of STAD. Besides, no significant difference in PFS or OS was observed in STAD patients with or without MMR genetic alteration. Moreover, MLH1 and MSH2 were used to establish a prognostic risk model. The immune infiltration levels of most immune cells were upregulated in the high-risk group with elevated expression of PDCD1 and low TMB score. Finally, we found that MLH1 was an independent predictor of STAD prognosis among the four MMR genes. An MMR-related prognostic model for STAD was constructed based on genes. This model provides a new therapeutic concept for the diagnosis and treatment of STAD.
错配修复(MMR)系统在维持DNA复制保真度和基因组稳定性方面起着至关重要的作用。MMR分子标志物作为晚期实体瘤免疫疗法的临床价值已有文献记载。然而,这种疗法在一些患者中并不有效。本研究旨在建立一种与MMR相关的分子预后模型,以识别适合的胃腺癌(STAD)患者群体,从而获得更好的治疗效果。从TCGA和CCLE数据库下载MMR基因表达数据。使用仙桃在线工具进行四个MMR基因的表达、预后风险模型的构建以及STAD中免疫浸润的评估。利用GEPIA2探索MMR基因表达与临床分期及总生存期的关联。在cBioPortal上对STAD中MMR基因的频率和预后价值进行分析。基于LinkedOmics数据库建立MLH1共表达网络。本研究发现,MSH2、MSH6和PMS2在STAD组织中的表达上调。此外,MMR基因表达水平的差异与STAD的临床分期无显著相关性。此外,有无MMR基因改变的STAD患者在无进展生存期(PFS)或总生存期(OS)方面未观察到显著差异。此外,利用MLH1和MSH2建立了预后风险模型。在高风险组中,大多数免疫细胞的免疫浸润水平上调,且程序性死亡受体1(PDCD1)表达升高,肿瘤突变负荷(TMB)评分较低。最后,我们发现MLH1是四个MMR基因中STAD预后的独立预测因子。基于基因构建了STAD的MMR相关预后模型。该模型为STAD的诊断和治疗提供了新的治疗理念。