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网络药理学与分子对接技术探究氯氮平致心脏骤停的机制

Network pharmacology and molecular docking to explore mechanisms of clozapine-induced cardiac arrest.

作者信息

Chen Ximing, Zhuo Chuanjun, Yang Lei, Zhang Qiuyu, Chao Li

机构信息

From the Computational Biology Centre and the Laboratory of Psychiatric-Neuroimaging-Genetic and Comorbidity, Tianjin Anding Hospital, Tianjin Mental Health Centre of Tianjin Medical University, Nankai University Affiliated Tianjin Anding Hospital, Tianjin, China.

From the Computational Biology Centre and the Laboratory of Psychiatric-Neuroimaging-Genetic and Comorbidity, Tianjin Anding Hospital, Tianjin Mental Health Centre of Tianjin Medical University, Nankai University Affiliated Tianjin Anding Hospital, Tianjin, China

出版信息

J Psychiatry Neurosci. 2025 Jan 3;50(1):E1-E10. doi: 10.1503/jpn.240065. Print 2025 Jan-Feb.

Abstract

BACKGROUND

Clozapine is superior to all other antipsychotics in treating schizophrenia in terms of its curative efficacy; however, this drug is prescribed only as a last resort in the treatment of schizophrenia, given its potential to induce cardiac arrest. The mechanism of clozapine-induced cardiac arrest remains unclear, so we aimed to elucidate the potential mechanisms of clozapine-induced cardiac arrest using network pharmacology and molecular docking.

METHODS

We identified and analyzed the overlap between potential cardiac arrest-related target genes and clozapine target genes. We conducted Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. We then constructed a protein-protein interaction (PPI) network and screened the core targets. We used molecular docking to evaluate the binding energy between clozapine and core targets.

RESULTS

We identified a total of 2405 target genes related to cardiac arrest and 107 target genes for clozapine. Among these, we found 41 overlapping target genes. The main enriched GO biological processes included the upregulation of the mitogen-activated protein kinase (MAPK) cascade and the adenylate cyclase-activating adrenergic receptor signalling pathway. The KEGG enrichment analysis showed that the neuroactive ligand-receptor interaction and the forkhead box O (FoxO) signalling pathway seemed to be the key signalling pathways involved in clozapine-induced cardiac arrest. The 7 core targets identified in the established PPI network were G-protein-coupled receptor kinase 2, 5-hydroxytryptamine 2A receptor, dopamine D2 receptor, glycogen synthase kinase 3β, cyclin-dependent kinase 2, CREB-binding protein, and signal transducer and activator of transcription 3. The molecular docking results indicated a high affinity between clozapine and all of these core targets.

LIMITATIONS

The relatively small scope of the predictive and modelling methods, which predominantly comprised network pharmacology and molecular docking strategies, is a limitation of this study.

CONCLUSION

Network pharmacology and molecular docking approaches unveiled target genes for clozapine and potential mechanisms by which it may cause cardiac arrest, including the MAPK cascade, neuroactive ligand-receptor interactions, and the FoxO signalling pathway.

摘要

背景

氯氮平在治疗精神分裂症方面的疗效优于所有其他抗精神病药物;然而,鉴于其有导致心脏骤停的可能性,该药物仅在精神分裂症治疗的最后阶段才会被使用。氯氮平诱发心脏骤停的机制尚不清楚,因此我们旨在运用网络药理学和分子对接技术来阐明氯氮平诱发心脏骤停的潜在机制。

方法

我们鉴定并分析了潜在的心脏骤停相关靶基因与氯氮平靶基因之间的重叠情况。我们进行了基因本体论(GO)和京都基因与基因组百科全书(KEGG)富集分析。然后我们构建了蛋白质-蛋白质相互作用(PPI)网络并筛选出核心靶点。我们使用分子对接来评估氯氮平与核心靶点之间的结合能。

结果

我们共鉴定出2405个与心脏骤停相关的靶基因以及107个氯氮平靶基因。其中,我们发现了41个重叠的靶基因。主要富集的GO生物学过程包括丝裂原活化蛋白激酶(MAPK)级联反应的上调以及腺苷酸环化酶激活的肾上腺素能受体信号通路。KEGG富集分析表明,神经活性配体-受体相互作用和叉头框O(FoxO)信号通路似乎是氯氮平诱发心脏骤停所涉及的关键信号通路。在建立的PPI网络中鉴定出的7个核心靶点为G蛋白偶联受体激酶2、5-羟色胺2A受体、多巴胺D2受体、糖原合酶激酶3β、细胞周期蛋白依赖性激酶2、CREB结合蛋白以及信号转导和转录激活因子3。分子对接结果表明氯氮平与所有这些核心靶点之间具有高亲和力。

局限性

本研究的局限性在于预测和建模方法的范围相对较小,主要包括网络药理学和分子对接策略。

结论

网络药理学和分子对接方法揭示了氯氮平的靶基因及其可能导致心脏骤停的潜在机制,包括MAPK级联反应、神经活性配体-受体相互作用以及FoxO信号通路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f4d/11684924/60ccd98c83ae/50-1-e1f1.jpg

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