Suppr超能文献

使用计算方法评估特级初榨橄榄油化合物:体外、ADMET、DFT、分子对接和人类基因网络分析研究

Evaluation of extra virgin olive oil compounds using computational methods: in vitro, ADMET, DFT, molecular docking and human gene network analysis study.

作者信息

Unsal Velid, Yıldız Reşit, Korkmaz Aziz, Mert Başak Doğru, Calıskan Cemile Gunbegi, Oner Erkan

机构信息

Department of Nutrition and Dietetics, Faculty of Health Sciences, Mardin Artuklu University, 47100, Mardin, Türkiye.

Energy Systems Engineering Department, Engineering Faculty, Adana Alparslan Türkeş Science and Technology University, 01250, Adana, Türkiye.

出版信息

BMC Chem. 2025 Jan 3;19(1):3. doi: 10.1186/s13065-024-01369-y.

Abstract

This study investigates the phenolic compounds (PC), volatile compounds (VC), and fatty acids (FA) of extra virgin olive oil (EVOO) derived from the Turkish olive variety "Sarı Ulak", along with ADMET, DFT, molecular docking, and gene network analyses of significant molecules identified within the EVOO. Chromatographic methods (GC-FID, HPLC) were employed to characterize FA, PC, and VC profiles, while quality parameters, antioxidant activities (TAC, ABTS, DPPH) were assessed via spectrophotometry. The analysis revealed a complex composition of 40 volatile compounds, with estragole, 7-hydroxyheptene-1, and 3-methoxycinnamaldehyde as the primary components. Hydroxytyrosol, tyrosol, oleuropein, apigenin, ferulic acid, and vanillic acid emerged as main phenolic constituents, with hydroxytyrosol and apigenin exhibiting high bioavailability. Molecular docking highlighted oleuropein and pinoresinol as compounds with strong binding affinities, though only hydroxytyrosol, apigenin, and pinoresinol fully met Lipinski and other drug-likeness criteria. DFT analysis showed that oleuropein and pinoresinol have notable dipole moments, reflecting polar and asymmetrical structures. KEGG enrichment analysis further linked key molecules like oleuropein and apigenin with pathways related to lipid metabolism and atherosclerosis, underscoring their potential bioactivity and relevance in health-related applications.

摘要

本研究调查了源自土耳其橄榄品种“Sarı Ulak”的特级初榨橄榄油(EVOO)中的酚类化合物(PC)、挥发性化合物(VC)和脂肪酸(FA),并对EVOO中鉴定出的重要分子进行了ADMET、DFT、分子对接和基因网络分析。采用色谱方法(GC-FID、HPLC)对FA、PC和VC谱进行表征,同时通过分光光度法评估质量参数、抗氧化活性(TAC、ABTS、DPPH)。分析揭示了40种挥发性化合物的复杂组成,主要成分是草蒿脑、7-羟基-1-庚烯和3-甲氧基肉桂醛。羟基酪醇、酪醇、橄榄苦苷、芹菜素、阿魏酸和香草酸是主要的酚类成分,其中羟基酪醇和芹菜素具有高生物利用度。分子对接突出显示橄榄苦苷和松脂醇具有很强的结合亲和力,不过只有羟基酪醇、芹菜素和松脂醇完全符合Lipinski及其他类药标准。DFT分析表明,橄榄苦苷和松脂醇具有显著的偶极矩,反映出极性和不对称结构。KEGG富集分析进一步将橄榄苦苷和芹菜素等关键分子与脂质代谢和动脉粥样硬化相关途径联系起来,强调了它们在健康相关应用中的潜在生物活性和相关性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1697/11699718/0a2de6fc6a11/13065_2024_1369_Fig1_HTML.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验