Haider Fatima, Syed Nida, Jaffari Syeda Abiha Zehra, Syed Basir, Ahmed Aftab, Zarina Shamshad, Hashim Zehra
Dr. Zafar H. Zaidi Center for Proteomics, University of Karachi, Karachi-75270, Pakistan.
Department of Biomedical and Pharmaceutical Sciences, School of Pharmacy, Chapman University, Irvine, CA92618, United States.
Curr Protein Pept Sci. 2025;26(5):365-377. doi: 10.2174/0113892037334325241014053319.
Triple-negative breast cancer (TNBC) is an aggressive type of breast cancer with a high recurrence rate. A new therapeutic intervention is urgently needed to combat this lethal subtype. The identification of biomarkers is also crucial for improving outcomes in TNBC.
The cell cytotoxicity of ML364 (2-(4-Methylphenylsulfonamido)-N-(4-phenylthiazol- 2-yl)-4-(trifluoromethyl)benzamide) was measured at different concentrations in TNBC-treated and untreated cells. The 2DE and LC-MS/MS analysis were used for protein identification of differentially expressed proteins. Furthermore, the quantitation of gene expression was demonstrated using RT-qPCR. TIMER, HPA, and UALCAN databases were utilized for further analysis.
Differentially expressed proteins and genes after ML364 treatment in TNBC were found to be linked with the USP2 (ubiquitin specific peptidase 2)-mediated pathway. Our results demonstrate that differentially identified proteins, including PPA1, TRIM68, and FBXO46, could be a potential prognostic biomarker for TNBC. Further analysis through the UALCAN and HPA databases shows the high expression of these proteins in primary breast tumors, which is in contrast to normal. The induction of ML364 significantly reduced the expression of PPA1, TRIM68, and FBXO46 proteins and induced cell cytotoxicity in TNBC cells.
This study provides an understanding of the USP2-mediated signaling pathway in TNBC, emphasizing the role of USP2 and its substrates with apoptotic genes. Our results offer insight into the USP2-mediated cellular mechanism after ML364 treatment in TNBC that could be a potential therapeutic candidate.
三阴性乳腺癌(TNBC)是一种侵袭性乳腺癌,复发率高。迫切需要一种新的治疗干预措施来对抗这种致命的亚型。生物标志物的识别对于改善TNBC的治疗效果也至关重要。
在经TNBC处理和未处理的细胞中,测定不同浓度的ML364(2-(4-甲基苯磺酰胺基)-N-(4-苯基噻唑-2-基)-4-(三氟甲基)苯甲酰胺)的细胞毒性。二维电泳(2DE)和液相色谱-串联质谱(LC-MS/MS)分析用于差异表达蛋白质的鉴定。此外,使用逆转录定量聚合酶链反应(RT-qPCR)证明基因表达的定量。利用TIMER、人类蛋白质图谱(HPA)和UALCAN数据库进行进一步分析。
发现TNBC中ML364处理后差异表达的蛋白质和基因与泛素特异性肽酶2(USP2)介导的途径有关。我们的结果表明,差异鉴定的蛋白质,包括磷酸丙糖异构酶1(PPA1)、三聚体基序蛋白68(TRIM68)和F-box蛋白46(FBXO46),可能是TNBC的潜在预后生物标志物。通过UALCAN和HPA数据库的进一步分析显示,这些蛋白质在原发性乳腺肿瘤中高表达,这与正常情况相反。ML364的诱导显著降低了PPA1、TRIM68和FBXO46蛋白的表达,并诱导TNBC细胞的细胞毒性。
本研究提供了对TNBC中USP2介导的信号通路的理解,强调了USP2及其底物与凋亡基因的作用。我们的结果深入了解了TNBC中ML364处理后USP2介导的细胞机制,这可能是一种潜在的治疗候选物。