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从MRIcro到MRIcron:神经影像可视化工具的演变。

From MRIcro to MRIcron: The evolution of neuroimaging visualization tools.

作者信息

Rorden Christopher

机构信息

McCausland Center for Brain Imaging, Department of Psychology, University of South Carolina, Columbia, SC, 29016, USA.

出版信息

Neuropsychologia. 2025 Jan 29;207:109067. doi: 10.1016/j.neuropsychologia.2025.109067. Epub 2025 Jan 4.

Abstract

Visualization software is a critical component at every stage of neuroimaging research. It enables researchers to inspect raw or processed datasets for artifacts, to identify anomalies, to verify the accuracy of automated processing, and to interpret the location of statistical results within the complex structure of the human brain. Since 2006, MRIcron has provided a free, open-source, cross-platform tool designed to meet these needs. Despite its minimal system requirements, MRIcron supports various popular neuroimaging file formats, ensuring compatibility with widely-used tools in the field, such as SPM, FreeSurfer, FSL, and AFNI. The intuitive graphical interface allows for straightforward image visualization and manipulation, while its advanced features such as lesion drawing and ability to handle many image formats cater to more sophisticated analyses. Furthermore, MRIcron's scripting capabilities enable users to automate complex workflows, facilitating the efficient processing of large datasets. In summary, MRIcron is a powerful and versatile tool that addresses the visualization and analysis needs of the neuroimaging community, contributing to the advancement of brain research by providing a reliable and efficient solution for brain imaging analysis. This article describes the development of MRIcron, from its inception to the present day.

摘要

可视化软件是神经影像学研究各个阶段的关键组成部分。它使研究人员能够检查原始或处理后的数据集是否存在伪影,识别异常情况,验证自动化处理的准确性,并在人类大脑的复杂结构中解释统计结果的位置。自2006年以来,MRIcron提供了一个免费的、开源的跨平台工具来满足这些需求。尽管其系统要求极低,但MRIcron支持各种流行的神经影像学文件格式,确保与该领域广泛使用的工具(如SPM、FreeSurfer、FSL和AFNI)兼容。直观的图形界面允许直接进行图像可视化和操作,而其诸如病变绘制和处理多种图像格式的能力等高级功能则适用于更复杂的分析。此外,MRIcron的脚本功能使用户能够自动化复杂的工作流程,便于高效处理大型数据集。总之,MRIcron是一个强大且通用的工具,满足了神经影像学领域的可视化和分析需求,通过为脑成像分析提供可靠且高效的解决方案,推动了脑研究的发展。本文描述了MRIcron从诞生到现在的发展历程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7787/12281029/f2f2a132a395/nihms-2097617-f0001.jpg

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