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p63的DBD连接区中的可变剪接在体外调节与DNA和iASPP的结合。

Alternative splicing in the DBD linker region of p63 modulates binding to DNA and iASPP in vitro.

作者信息

Lotz Rebecca, Osterburg Christian, Chaikuad Apirat, Weber Sabrina, Akutsu Masato, Machel Anne Christin, Beyer Ulrike, Gebel Jakob, Löhr Frank, Knapp Stefan, Dobbelstein Matthias, Lu Xin, Dötsch Volker

机构信息

Institute of Biophysical Chemistry and Center for Biomolecular Magnetic Resonance, Goethe University, 60438, Frankfurt, Germany.

Institute of Pharmaceutical Chemistry, Goethe University, 60438, Frankfurt, Germany.

出版信息

Cell Death Dis. 2025 Jan 6;16(1):4. doi: 10.1038/s41419-024-07320-2.

DOI:10.1038/s41419-024-07320-2
PMID:39762243
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11704248/
Abstract

The transcription factor p63 is expressed in many different isoforms as a result of differential promoter use and splicing. Some of these isoforms have very specific physiological functions in the development and maintenance of epithelial tissues and surveillance of genetic integrity in oocytes. The ASPP family of proteins is involved in modulating the transcriptional activity of the p53 protein family members, including p63. In particular, iASPP plays an important role in the development and differentiation of epithelial tissues. Here we characterize the interaction of iASPP with p63 and show that it binds to the linker region between the DNA binding domain and the oligomerization domain. We further demonstrate that this binding site is removed in a splice variant of p63 where a stretch of five amino acids is replaced with a single alanine residue. This stretch contains a degenerate class II SH3 domain binding motif that is responsible for interaction with iASPP, as well as two positively charged amino acids. Moreover, the concomitant loss of the charged amino acids in the alternatively spliced version decreases the affinity of p63 to its cognate DNA element two- to threefold. mRNAs encoding full-length p63, as well as its alternatively spliced version, are present in all tissues that we investigated, albeit in differing ratios. We speculate that, through the formation of hetero-complexes of both isoforms, the affinity to DNA, as well as the interaction with iASPP, can be fine-tuned in a tissue-specific manner.

摘要

转录因子p63由于启动子使用和剪接的差异而以多种不同的异构体形式表达。其中一些异构体在上皮组织的发育和维持以及卵母细胞遗传完整性监测中具有非常特定的生理功能。ASPP蛋白家族参与调节p53蛋白家族成员(包括p63)的转录活性。特别是,iASPP在上皮组织的发育和分化中起重要作用。在这里,我们描述了iASPP与p63的相互作用,并表明它与DNA结合结构域和寡聚化结构域之间的连接区结合。我们进一步证明,在p63的一个剪接变体中,这段由五个氨基酸组成的序列被单个丙氨酸残基取代,该结合位点被去除。这段序列包含一个负责与iASPP相互作用的简并II类SH3结构域结合基序,以及两个带正电荷的氨基酸。此外,剪接变体中带电荷氨基酸的同时缺失使p63与其同源DNA元件的亲和力降低了两到三倍。编码全长p63及其剪接变体的mRNA存在于我们研究的所有组织中,尽管比例不同。我们推测,通过两种异构体形成异源复合物,可以以组织特异性方式对DNA亲和力以及与iASPP的相互作用进行微调。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/3fff9c387c1a/41419_2024_7320_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/a606f3859615/41419_2024_7320_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/8eefd706d80b/41419_2024_7320_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/e07bc1ec33bc/41419_2024_7320_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/c6bb5e7332c6/41419_2024_7320_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/4a4243b5ca54/41419_2024_7320_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/608008bf435a/41419_2024_7320_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/3fff9c387c1a/41419_2024_7320_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/a606f3859615/41419_2024_7320_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/8eefd706d80b/41419_2024_7320_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/e07bc1ec33bc/41419_2024_7320_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/c6bb5e7332c6/41419_2024_7320_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/4a4243b5ca54/41419_2024_7320_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/608008bf435a/41419_2024_7320_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32de/11704248/3fff9c387c1a/41419_2024_7320_Fig7_HTML.jpg

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本文引用的文献

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Disease-related p63 DBD mutations impair DNA binding by distinct mechanisms and varying degree.疾病相关的 p63 DBD 突变以不同的机制和不同程度损害 DNA 结合。
Cell Death Dis. 2023 Apr 18;14(4):274. doi: 10.1038/s41419-023-05796-y.
2
Mutant Ras and inflammation-driven skin tumorigenesis is suppressed via a JNK-iASPP-AP1 axis.突变型 Ras 与炎症驱动的皮肤肿瘤发生受 JNK-iASPP-AP1 轴的抑制。
Cell Rep. 2022 Oct 18;41(3):111503. doi: 10.1016/j.celrep.2022.111503.
3
Structural diversity of p63 and p73 isoforms.p63 和 p73 异构体的结构多样性。
Cell Death Differ. 2022 May;29(5):921-937. doi: 10.1038/s41418-022-00975-4. Epub 2022 Mar 21.
4
iASPP mediates p53 selectivity through a modular mechanism fine-tuning DNA recognition.iASPP 通过一种模块化机制精细调节 DNA 识别,介导 p53 的选择性。
Proc Natl Acad Sci U S A. 2019 Aug 27;116(35):17470-17479. doi: 10.1073/pnas.1909393116. Epub 2019 Aug 8.
5
Epigenetic Regulation of iASPP-p63 Feedback Loop in Cutaneous Squamous Cell Carcinoma.组蛋白乙酰化调控 iASPP-p63 反馈环路在皮肤鳞状细胞癌中的作用
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Cell autonomous role of iASPP deficiency in causing cardiocutaneous disorders.iASPP 缺乏导致心皮发育障碍的细胞自主性作用。
Cell Death Differ. 2018 Jul;25(7):1289-1303. doi: 10.1038/s41418-017-0039-6. Epub 2018 Jan 19.
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MolProbity: More and better reference data for improved all-atom structure validation.MolProbity:用于改进全原子结构验证的更多更好的参考数据。
Protein Sci. 2018 Jan;27(1):293-315. doi: 10.1002/pro.3330. Epub 2017 Nov 27.
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TP63 mutations are frequent in cutaneous melanoma, support UV etiology, but their role in melanomagenesis is unclear.TP63突变在皮肤黑色素瘤中很常见,支持紫外线病因学,但它们在黑色素瘤发生中的作用尚不清楚。
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